Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_05002 |
Symbol | |
ID | 5558835 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009784 |
Strand | - |
Start bp | 258932 |
End bp | 259969 |
Gene Length | 1038 bp |
Protein Length | 345 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640909480 |
Product | integrase |
Protein accession | YP_001447136 |
Protein GI | 156976230 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAGTAC GCAATTTGAA AGATGGCTCA ACCAAACCTT GGATCTGTGA ATGCTACCCA AACGGGAGAG CAGGAAAACG CGTTCGTAAG AAGTTCGCTA CAAAAGGCGA AGCTAAAGCC TTTGAGCTTC ACACAATGAA AGAGATTGAC GATAAGCCCT GGATGGGTAT TAAACCGGAT AACCGAAGAA TGAGTGAGCT TTTGGAAAAT TGGTGGACTA TCCATGGCCA TACTTTAAAG TCAGGCAAGC AAGCCAAAGA TCTCATATCC AAAACAATTG AAGAGTTAGG TAACCCAATT GCCTGCCAGT TTAAAGAACG AGACTACCTG GCGTATCGAG CAGCTCGAAC CCCCTATCGG GGCAAGAATA AATCCATCGA GATATCTCCA ACCACACACA ACCTTGAACT GATTTATCTA AAGGGCATGT TCAAGAAGCT GATTAAGTAC AATCAGTGGA AATATCCCAA CCCGCTTGAA GCAATCGAGC CTATCAAAAC CAGTGAGAAG CATCTTGCCT ATCTAACCAA GCCACAAATC GACGAGTTCT TTGATGAACT GCAGAACTGT AAGCGAGTTA TCAAGGCATC AATCCCACAA ATTATTGTCA TCGCAAAAAT CTGTTTGGCC ACCGGTGCAC GAATCAGTGA GGCACTCACT CTGACTCGCA CTCAAATAAC CGAGTTCAAA TTGACTTACA CCGATACAAA AGGGAAAAGG AATCGCAGTG TGCCAATCTC ACCATCTTTA TATCAAGAGA TATTAGATAT AGCGGTAAGC GACCATGACA TATTTAACAC CAGCTACAAA GATGCTTGGC GTTACATAAA AAGAGCCTTG CCTGAGCACG TTCCGAATGG GCAAGCGACC CATGTTTTAC GGCATACTTT TGCTTCGCAC TTTATGATGA ATAAAGGGGA TATTTTGGTG CTGCAGCGTA TTCTTGGCCA CACAAAAATC GAGCAAACAA TGGCTTATTC TCATTTTGCC CCAGAGCATT TGATGCAGGC TGTTCACCTC AATCCTTTAG AGAATTAG
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Protein sequence | MSVRNLKDGS TKPWICECYP NGRAGKRVRK KFATKGEAKA FELHTMKEID DKPWMGIKPD NRRMSELLEN WWTIHGHTLK SGKQAKDLIS KTIEELGNPI ACQFKERDYL AYRAARTPYR GKNKSIEISP TTHNLELIYL KGMFKKLIKY NQWKYPNPLE AIEPIKTSEK HLAYLTKPQI DEFFDELQNC KRVIKASIPQ IIVIAKICLA TGARISEALT LTRTQITEFK LTYTDTKGKR NRSVPISPSL YQEILDIAVS DHDIFNTSYK DAWRYIKRAL PEHVPNGQAT HVLRHTFASH FMMNKGDILV LQRILGHTKI EQTMAYSHFA PEHLMQAVHL NPLEN
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