| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_04999 |
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| Symbol | |
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| ID | 5558791 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio harveyi ATCC BAA-1116 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009784 |
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| Strand | + |
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| Start bp | 253852 |
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| End bp | 256179 |
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| Gene Length | 2328 bp |
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| Protein Length | 775 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640909477 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_001447133 |
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| Protein GI | 156976227 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAAAGT CTGTAAAAAA AATATCAAGC CAAAGAATCA TCACCATTAG TGCGATTTTA
GTGTCGCTCT ACTTGGCGAT GATTATTACG GTAACGAGTT TAGGTCAAAA TAAATTAAAA
GATTCACAAC ACCGAGAACT CGACTTAAAG GTGAAAAGTT ACGCAGGTAC CCTTGATAAT
TTATTTACGC TTGCCAGCGA AGATGTCGAT CATTTATCCA CCGATAAAAC GGTGCAGACT
TTTTTTGCCA ACCTTGCTTC CGGGATGTCG ATGGAATACG GGTTAGGCGC GAGCTTGATC
AATTTGAAGC GTAAGCTCCA AGAGAAAGCA GAAGCGAAAA CCGTCAATAA TCAAATCATC
TATAAAAAGC TGACACTAAT CGGGTTAGAT GGCTCTACTA TTGTGACCAC TGGCGAAAAA
ACCGATCATC GTATAGACAC TTCCCGACTG CTTAACGAGC ACGATCACCC TGAAGAAGTC
AGAGCGATAC GAGAGGGCGG CAAAGTCCTT ATTCAAGTGG TCAAGCAAGT GATGTTCTCT
GGTAAGCCTG TTGGCTACTT GATTGCAGAC ATCAACAAAC AAGTGGTGAT TTCCCAACTG
ACTAATCAGG AACACGAAGA CAGCTACAGT CGTATGGTGC TGAAGATCAA TGATGTTGAA
ATGGAAGTGT GGGACTCGAT CAGTCGCAAA CTCGAACAAG AAAACATCAC GGCACCAGAA
GCATTAGCTC AAGAGTTAAA GCAAAAAATC TACTTTGAAG TTCCGATCGA ACATCATCAC
TTTAAATTAA TGGCGTGGTT TGAGTCATTA AGTGAACGTG ACATCTACAC CTCTCGTCTG
TTCATCAATG GTTTGAGTGT TCTCGCTATC ATGATTGTCG TTGGACTACT GTACGCATTC
ACCCTTAATA ACACTCGTGT CGAACTGAAA ATCAAACTGG AAGAAGAGAA AAAGCGTAAA
GATTTCTTGT CTCAGCAAAA CGAGCGTTTA ACCAGTGAAA TTGAGCGCCG TAAATCGTCC
GAGATGGAGC TGGCATATCA AGCCAAACAT GATGCACTTA CTGGCTTGCC TAACCGTGTT
TATGGTTCTG AACGTTTGGA TTTAGAGTTG TCACGCGCAG AGCGAATGAA ATCAAACGTA
CTGGTCATGT TTATCGACCT TGACCACTTT AAACAAATCA ATGATTCAAT GGGGCACTTC
GTTGGTGACG AAGTGTTAAA GCTGGCGGCA GAGCGATTGC ACAACGCAGT ACGTAAAACC
GATTTGTTGG CACGCATTGG TGGTGATGAA TTCCTGTTGG TTATCCCTGA TTTACAAGAT
GTCGACAGCG CAAAACGTTT TGCAGCTACC GTGCTGTCGG TATTCAACGA GCCGTTCGTT
TGGCAAAACC ACGAGTTCTT CCTGTCGGCG AGTGTCGGTA TGTCGGTGTT CCCTGAAGAT
GGCGACAATG CAGAGCAGCT ACTGGCGTGT GCGGACATGG CGATGTACCG AGTGAAACAA
GATGGCCGTA ATGCATTCTG CTTCTATGAT CACAACATGA ACCAAGATTT GCAGCGCTTC
CTAGAGCTAG AAAGTCGTCT TCGTCATGCC ATTTCTCATG ATCTTCTGGA GCTGTATTAC
CAACCTATTA TCGATCTCGA TAGCGGCGTC ATTGTTGGTG CAGAGGCTCT GATGCGTTGG
AACGACGAGA AGTTTGGCTT TGTGAATCCA GAAGAGTTTA TCTCCATCGC CGAAAAGAAC
GGTCTGATTC ATCAGCTGGG CGACTTTGCG ATTCGTCAAG CTTGCCAACA GGCGGCACAG
TGGCAGGATG TTGCACCGCT GTTTGTGTCG GTAAACTTCT CAAGTGTGCA GTTTAGATAC
TGTGATCGAC TCTTCGAACA GATCAAGCAG CACATAGAAG AGTCGGGCTT GTCACCTGAA
TTGTTTGATG TGGAAGTGAC AGAGAGCTTG TTGTTCAACC ACAGTAGCGA CTTGATGGAG
ATGCTAGACA ACTTACGAGC ACTGGGCGCT AAGCTCACCA TTGATGATTT CGGCACGGGT
TACTCGGCGT TGAGTTACTT ACAGAAGTTC CCGTTTGATC GCCTTAAGAT CGACCGCAGC
TTCTTGCAGA ACATGTTTGA GAATGAGTCC GACCGTGAGC TTGTGAACGT GATTATTGCG
ATGGCGAAAG CGCTGAATCT GAAGATTGTT GCAGAAGGCA TCGAAGAACA GCGTCATGTG
GATTACTTGA AAAACCTAAA CTGTGAGTTC GGGCAAGGTT TCCACTATAG CCGACCATTA
CCCGCTAAGG ACTTTGAAGC GCTTTTAGCT AAGCCAACTT GGCTATAA
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| Protein sequence | MRKSVKKISS QRIITISAIL VSLYLAMIIT VTSLGQNKLK DSQHRELDLK VKSYAGTLDN
LFTLASEDVD HLSTDKTVQT FFANLASGMS MEYGLGASLI NLKRKLQEKA EAKTVNNQII
YKKLTLIGLD GSTIVTTGEK TDHRIDTSRL LNEHDHPEEV RAIREGGKVL IQVVKQVMFS
GKPVGYLIAD INKQVVISQL TNQEHEDSYS RMVLKINDVE MEVWDSISRK LEQENITAPE
ALAQELKQKI YFEVPIEHHH FKLMAWFESL SERDIYTSRL FINGLSVLAI MIVVGLLYAF
TLNNTRVELK IKLEEEKKRK DFLSQQNERL TSEIERRKSS EMELAYQAKH DALTGLPNRV
YGSERLDLEL SRAERMKSNV LVMFIDLDHF KQINDSMGHF VGDEVLKLAA ERLHNAVRKT
DLLARIGGDE FLLVIPDLQD VDSAKRFAAT VLSVFNEPFV WQNHEFFLSA SVGMSVFPED
GDNAEQLLAC ADMAMYRVKQ DGRNAFCFYD HNMNQDLQRF LELESRLRHA ISHDLLELYY
QPIIDLDSGV IVGAEALMRW NDEKFGFVNP EEFISIAEKN GLIHQLGDFA IRQACQQAAQ
WQDVAPLFVS VNFSSVQFRY CDRLFEQIKQ HIEESGLSPE LFDVEVTESL LFNHSSDLME
MLDNLRALGA KLTIDDFGTG YSALSYLQKF PFDRLKIDRS FLQNMFENES DRELVNVIIA
MAKALNLKIV AEGIEEQRHV DYLKNLNCEF GQGFHYSRPL PAKDFEALLA KPTWL
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