| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_04988 |
|---|
| Symbol | |
|---|
| ID | 5558305 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio harveyi ATCC BAA-1116 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009784 |
|---|
| Strand | - |
|---|
| Start bp | 243685 |
|---|
| End bp | 244614 |
|---|
| Gene Length | 930 bp |
|---|
| Protein Length | 309 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640909466 |
|---|
| Product | transcriptional regulator |
|---|
| Protein accession | YP_001447122 |
|---|
| Protein GI | 156976216 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTTAACC CAAAACTTAT CGCCCTACTC CCTGATCTTG CTTCGTTTAT CTTAGTGGTA
AATGAAGGTA GCTTTACTGC TGCCGCCAAA CAACTCGGTG TGACACCGTC AGCGCTTAGT
AAGCTGATCA CGCGCCTAGA GCAAGCACTC TCAGTAAAAT TGTTTGAGCG CACCACTCGC
AAATTGATCA TCACGCAAGC AGGGCAAAAA GTTTACGACC AAAGCATTGC CATGGTAAAC
GCGGCTCAGC AAGCGGTTGA ATTGTCGGCG GAAGATCATG CCGAGCCCAC TGGAGCTCTC
ACAGTGGCGG CTCCCGAAGC GTTTCTTAAT TCGGTGCTGC AACCATTTGT GCTGCCATTT
CTAGACCGCT ATCCAAATAT ACAGCTCAAA CTGCGCGCTG CCGATGGTGA GATTGATCTG
TTTCGCCAAG GCATCGATGT TGCGTTTAAG CTCACCGACA AACCCGATGA GAATCTGGTA
CTCAAAGAGA TCAGCAAGAC CAATTTGGTT TTGTGCGCTT CTCCAGATTA CCTAGCCAAA
CACGGCATGC CAGCGCACCC AACCGAGCTT GAGCAGCACG ACTGTATTTA CCTTGCAGAG
AACGACAAAG ACAACATCTG GTCATTCTTC AAAGAGGAAG CGTTCCACTC GATTGCAGTG
AGTGGCCGTT ATGCCGTCAA CCACTCTCAA ATGCGCTTAA ATGGCGTCAA GTCCGGCTTA
GGAATTGGGA TCTTTCACGA CTTCGTGATT AAAGACGCGT TAGAACAAGG TGAGGTAGTG
GAAGTTTTAC CGGATTGGAT GATAAAAAGT AATTACCACG GTGCTATCGC GATGCAGTAT
GCACAAACCA AGTATATGCC TGCTCGCCTG CGTGTTTTTA TCGACTTCGT AAAGGAGCAT
TTAGTCTCCG AGGACACTAA CCATGCTTGA
|
|---|
| Protein sequence | MVNPKLIALL PDLASFILVV NEGSFTAAAK QLGVTPSALS KLITRLEQAL SVKLFERTTR
KLIITQAGQK VYDQSIAMVN AAQQAVELSA EDHAEPTGAL TVAAPEAFLN SVLQPFVLPF
LDRYPNIQLK LRAADGEIDL FRQGIDVAFK LTDKPDENLV LKEISKTNLV LCASPDYLAK
HGMPAHPTEL EQHDCIYLAE NDKDNIWSFF KEEAFHSIAV SGRYAVNHSQ MRLNGVKSGL
GIGIFHDFVI KDALEQGEVV EVLPDWMIKS NYHGAIAMQY AQTKYMPARL RVFIDFVKEH
LVSEDTNHA
|
|---|
| |