Gene VIBHAR_04979 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_04979 
Symbol 
ID5558853 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand- 
Start bp236086 
End bp237087 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content48% 
IMG OID640909458 
Productelastase 
Protein accessionYP_001447114 
Protein GI156976208 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG5640] Secreted trypsin-like serine protease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGACCAC TGGCTGTTTG TGCAGAAACG GCGAATAACG GTGACAACTC TGATTTCACA 
ACATTTATTA TTGGCGGCCA ACAAGCCTCT GCTAATCAAC TCCCTTTCTT TGCTCGCCTA 
ATATTGCACC GCACTGGCTC ACGTCAGTTT GCCAACATCT GTGGTGGTAC GATCGTCAAT 
GACCGCTACA TCATGACCGC TGCACACTGT GTAGAATCGG ACGTATTTAC TGATGGTTGG 
ACAATCAATG ATCTTAGAGT CTTAGTGAAG AACCCAACCA TGAATGATGT GTTTGTGGAA 
GAGTTCAAAG ACGTACGTTC GATTACGATT CATCCAGACT ACAATCCCAA TGACCTGTGG 
ATTAACGATA TCGCCATTTT GGAGCTCACT CGTCCAATCA CTGATAACGT TCAATCTATC 
ACTTTGCCGC AAGACTTTGG TGACTACAGT AACCAGTCGG TGTACCAGAT CTTCGGGCTT 
GGGCAAACGT CAACCGACGA CCAAACAGGA CCGAATTACC TTCGCTGGGC AGAAATTCAG 
CCGCTCACCG ATAGCCAATG TATTTCACTC GTGCCCGACT TTAACTCGCA AGAAAGTTTG 
TGTGCGAATG GCTTTCCAGA CCGCGATTAC ACAGGGATTT GTAGTGGCGA TTCGGGCGGA 
CCATTAACCT ACCAGGATAA CAACGGGAAC TATCAGCAAA TCGGTATTGT CAGTTATGGT 
TCTTCTAGAT GTGAATCCCC AGCGATTCCA AGCGTATTTA CCGAAGTGTT GAATTACACC 
CCGTGGATCG AAGCACAAAC CAGCGCTGGA ACAAAAACGA CTTATGATGC CTCGCTTGCG 
GCAACCGAGG ATTATCATAG TGAAGGAGAC TCCGGTTTTG ACCCAGAAGA TACCACCAGT 
AACGACTTTG GCAGCAATGA CAGCGGTGGG GGTTCTATCG GGTTCGGATG GCTCGCATTA 
GGCGGTTTAC TCACGTGGTT AAGACGTCGA GAAACCTTGT AG
 
Protein sequence
MGPLAVCAET ANNGDNSDFT TFIIGGQQAS ANQLPFFARL ILHRTGSRQF ANICGGTIVN 
DRYIMTAAHC VESDVFTDGW TINDLRVLVK NPTMNDVFVE EFKDVRSITI HPDYNPNDLW 
INDIAILELT RPITDNVQSI TLPQDFGDYS NQSVYQIFGL GQTSTDDQTG PNYLRWAEIQ 
PLTDSQCISL VPDFNSQESL CANGFPDRDY TGICSGDSGG PLTYQDNNGN YQQIGIVSYG 
SSRCESPAIP SVFTEVLNYT PWIEAQTSAG TKTTYDASLA ATEDYHSEGD SGFDPEDTTS 
NDFGSNDSGG GSIGFGWLAL GGLLTWLRRR ETL