| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_04978 |
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| Symbol | |
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| ID | 5558852 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio harveyi ATCC BAA-1116 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009784 |
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| Strand | - |
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| Start bp | 233758 |
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| End bp | 235962 |
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| Gene Length | 2205 bp |
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| Protein Length | 734 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640909457 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_001447113 |
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| Protein GI | 156976207 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAATG CTGCATCGGA TCGCCGTATT AAAGTTAAAG CGATGCTGTT TCTGACGCTT
GGTGTCACCT TCTCTGTGTT TGCCGGATTT GCCCTTTCGC AGATGTTTGT CATAGAAAAA
GATGCATTCC AGCTTATCTC GGTGGTGAGT TCGGTTATGG TGGTGAGTTT TTTGCGCTAT
CAATGGCGAG CCTTGCCTGC AATTAACTTG AGCTTGTTCG CCTACTATGC CTTTACCGGT
CGAAGCCCTG AGCATGCCTT GTTGTATTCG CTCACCGTTC CGATCTTACC TTTTGCGTTT
TCAAGCCTAT TTCACTATCT AAACAATCGC TCGCTACATC AACCAGCCGC ACAGCGGATC
AGCCTGTTTT TTGTCATTAT GGGCTGTTTA TTTCCTTTCG CGAATACCAT CAAAATCATG
TTGGTGAATA CCTTCGTTGA TGGCCAGTTT TTAAGTCCTG ATTTTCTATT TTATGCCACG
TTAGGCAATT ACTTAACTCA ACTGTTGGTA ACACCTATTT TATACGTGCT GGTGAGCCTG
TTGACGGATA CCGATACCCA GTCTTACCTC GCTTTGGATA AACGTTTAAG AATCTCTAAT
AGCCGCTGTC GAGGCTATTT AGCGTGGCTC GCGAGTTGCA TCGCGATTTT CATTGCTGCC
GCGCTTTCTT CCACCTCTTT CATGCTCAAT TCGCTCAGCT TCTTCGCCGT TTTGCTTGTC
GTCGTTGGCT TGGCAAAACA CGGCTTGATT CGGCCACTCT TTGTCGGCTC GCCATTTATC
TTGTTGATAA TCAATGACGG TATCAGCCAC TACAACCAAG CATTAATTGG AGACAAACAG
TTCTACGGCT TATTGATCAT CATTACTGTG CTTACCACCT TGGCGTATTT ACTGGGCGGC
TACTCGGTAA AACTGTTTGA GATGACACAA AAGCAGATCC GCTCCGAGCG TATCGATCCA
TACTCTGGAC TATCGAACAT TGCTCAGCTG AAAGAAGACA TCAGTCACCA ATCTCGTTCT
TTGCTCATCT ACCTTGACTT AACACCCACA TTATCGATGT TGACCGATTT GGGCCATGAG
GGAAAATCTC AGCTTATCAT GCAACTCAGT GAGTTTTTGT ACTCACGGAA CAACAGCATA
AATCGTTGTT ATCGGCCACC TTTCTCAACG GGTCTACTGA GCTTTACCCA TTACTCAGAT
ACCGCAGAAG AGGACCTTAA CGAGGTCGCG GACTACTTAG AAAGCTTCCA ATTTTATTGG
CGAGGTACAT CGGTTGCACT AGTCTCCCCA ACCATTTTCT GCACGCTCGT CAGCCAAGAT
CAGGACATTG AGAAAGTGGT GTCGATTCTG TGCGATCAAC CGCCTCAAAG TGATAGCAGT
ATCCATTGGA TTAAGATCCA ATCTTTCGAA ATGGACCGCG TGGACAAACT GAACCACATT
CAACAAGTGT TTAAGCGCGA ACAATTTGAG TTGTTCTGCC AACCATACAT GAAGCTTTCT
GAATCTGAGC CGTCGAAACA CAGCTTTGAA GTACTCCTTC GCCTGAAAGA GCAAGATGGG
CAAGTTCTAC CACCTTCGGC ATTTTTCCCA TTGATTAATC AATTTGGTTT AGAGCTCAAG
CTCGATCACT GGGTCATTCT CAATACCTTC CGAATGCTGA GTGACAAGGT GAAGAATTGG
AATAACATTG GTCACTGCGC CATCAACTTG ACCGCCAAAA CACTCAGTGC CGAGAACCTT
GCAGTGCGCA TCATTGAAAG TGCGCAAAGC TTTTCGATTC CGCTGAACAA GATTTGCTTT
GAGATCACCG AATCATCCGC ACTCATCAAT GAGCAACAAG CCATTGCAAA CTTGAGCCAC
TTACGAGATC ACGGCTGTAA GATTGCGATA GACGACTTTG GAACAGGCTA CGCTAGCTTC
GCGTACTTGC GCAGATTGCC ATTGGATATT CTTAAAATTG AAGGGGCGTT TGTTCGTGAG
ATCACGCAGA GTGAGACGGA CCGTTTGATC GTCAGCTCCA TTGTAACGGT CGCAAAAGAA
ATGCATTTAG AGACGGTGGC AGAATTTGTC GAGAGCACTA CACACATAGC GATATTAAGA
AACTTGGGCA TCGACTTTGC GCAAGGTTAT GGCGTCGCGA AACCTATGCC TTTGAGCAAA
TGTTTAGATG AGCTATTTGA AGTTGAACAC CTCAATCAGA GCTGA
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| Protein sequence | MNNAASDRRI KVKAMLFLTL GVTFSVFAGF ALSQMFVIEK DAFQLISVVS SVMVVSFLRY
QWRALPAINL SLFAYYAFTG RSPEHALLYS LTVPILPFAF SSLFHYLNNR SLHQPAAQRI
SLFFVIMGCL FPFANTIKIM LVNTFVDGQF LSPDFLFYAT LGNYLTQLLV TPILYVLVSL
LTDTDTQSYL ALDKRLRISN SRCRGYLAWL ASCIAIFIAA ALSSTSFMLN SLSFFAVLLV
VVGLAKHGLI RPLFVGSPFI LLIINDGISH YNQALIGDKQ FYGLLIIITV LTTLAYLLGG
YSVKLFEMTQ KQIRSERIDP YSGLSNIAQL KEDISHQSRS LLIYLDLTPT LSMLTDLGHE
GKSQLIMQLS EFLYSRNNSI NRCYRPPFST GLLSFTHYSD TAEEDLNEVA DYLESFQFYW
RGTSVALVSP TIFCTLVSQD QDIEKVVSIL CDQPPQSDSS IHWIKIQSFE MDRVDKLNHI
QQVFKREQFE LFCQPYMKLS ESEPSKHSFE VLLRLKEQDG QVLPPSAFFP LINQFGLELK
LDHWVILNTF RMLSDKVKNW NNIGHCAINL TAKTLSAENL AVRIIESAQS FSIPLNKICF
EITESSALIN EQQAIANLSH LRDHGCKIAI DDFGTGYASF AYLRRLPLDI LKIEGAFVRE
ITQSETDRLI VSSIVTVAKE MHLETVAEFV ESTTHIAILR NLGIDFAQGY GVAKPMPLSK
CLDELFEVEH LNQS
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