Gene VIBHAR_04970 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_04970 
Symbol 
ID5558043 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand
Start bp225687 
End bp226739 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content42% 
IMG OID640909449 
Producthypothetical protein 
Protein accessionYP_001447105 
Protein GI156976199 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTACCT ATGCCAAATT TTATAATCCA ATGGCATATT TAATTAAACC TTCTATGTCA 
GGGAATTGTG ATAAATACCT ACAAAGAAGC CGTTTGATAA TATTTTATAA AGTATTCCTG
TTAGCTGGTT TAACTTCACC TAGTTTTGCA TCGGCAGGTG AGAAAATCAC CGTTCCAATG
GATCTTTCTA CTTGGCTATA TAAAGGAAAT AAATTTGAAT GCAACTTAAT GCACTCAAAT
ATTCCTGAGG GGAAGTTTTA TTTCCGCGCG GAACCAAATA ACCGAGTTTC TTTTATTGCC
AACGTTCATA ATAACAACAA TAAATGGAAC GGCGCTGTAT TGCTTAGTGA GAGTGCACCG
TGGGAAGGAG AGCTTTTAAG AAAAGAAGAG GCTTCGCTTG CGTTTACCTC GGCAACTAAC
CAGTTCGCTT TCTCGCATGG TACAGAGTCT CTGCTTGCAT CCATTTCTTC CGGAAGCTGG
ATTACGCTGT CACTTAGTGG AAGTGAAGGT TCCCCTCTCA GCAGTATCAC TCTTCCAACC
ATTCAAATAC AAAATGCATT GGCCTCATTC AATCAATGTC GAGATCAATT GCCAAAGTCA
TCTTACTCCC AGGCTCGTGA TGTGAATTTA CCATTTCAGT TTGGTCAAAA AACATTAAGC
CGCAGCCAAC AAAGTACCTT GGCAGCACTC TACAGTTACA TTTCTGTCGA TGATCGCGTC
ACCAAAATTC TTGTCGATGG CCATACCGAT AATGTTGGCT CTCAATTGGC GAATTTAAAT
GTATCTCGCC AGCGAGCTGA GCAAGTCGCA GAGGCTTTGA TTCAACAAGG TGTTGACCGT
TCTTTGATTG AAGTTCGTGC TCATGGCTCG CGATACCCAA TTGCCAGTAA TAACACCCAA
GCAGGGCAAG CCAAAAACCG TCGAGTGACA CTGCGTTTGG TTCGAGATAA CGAGCGTGTG
ATTACTAAAA ATGACTTGGC CAGACACACG ACAGGCAAAA GCAACCCAGA AATAAAACAA
CAACCCCAAC AAGAGAAGGT AAAGGTTCAA TGA
 
Protein sequence
MITYAKFYNP MAYLIKPSMS GNCDKYLQRS RLIIFYKVFL LAGLTSPSFA SAGEKITVPM 
DLSTWLYKGN KFECNLMHSN IPEGKFYFRA EPNNRVSFIA NVHNNNNKWN GAVLLSESAP
WEGELLRKEE ASLAFTSATN QFAFSHGTES LLASISSGSW ITLSLSGSEG SPLSSITLPT
IQIQNALASF NQCRDQLPKS SYSQARDVNL PFQFGQKTLS RSQQSTLAAL YSYISVDDRV
TKILVDGHTD NVGSQLANLN VSRQRAEQVA EALIQQGVDR SLIEVRAHGS RYPIASNNTQ
AGQAKNRRVT LRLVRDNERV ITKNDLARHT TGKSNPEIKQ QPQQEKVKVQ