Gene VIBHAR_04964 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_04964 
Symbol 
ID5558407 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand
Start bp221146 
End bp222273 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content48% 
IMG OID640909443 
Productflagellar biosynthesis pathway, component FlhB 
Protein accessionYP_001447099 
Protein GI156976193 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1377] Flagellar biosynthesis pathway, component FlhB 
TIGRFAM ID[TIGR00328] flagellar biosynthetic protein FlhB 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGAAC AGTCGTCTCA AGACAAAACC GAGAAAGCCT CCCCCCAGAA GGTAAAAAAA 
GCACGTCAAG AAGGGCAAAT TCCTCGTGCA AAAGAGTTCA CTACCGCGGT TATCTTCTTA
GCCGTTGCGA TGTTTTTCTA CTCCCAGCTC AATAGCATTT GGGAGAGTAT GTCGGGCGTA
TTTCGTTACA ACATGACCCT AACCAAAGCA GACCTAGAAA ACCCAAAACA ATTGGTGGAG
CATCTTGGTC AGAGCTTGGC GGTGATCATT GAGATGCTCT TGCCTCTCTT CACCGTTATC
ATCATTGTCG CCTTTGGCAG CAGCATGGTG CTAGGGGGCT GGATGTTCCG TCCCGCGAAC
GTGCTACCGA AACTGAGTAA GCTCAATCCT ATCTCGGGCA TTAAACGTAT TTTCTCCACT
CGCTCTGTGG TGGAGTTGGT TAAATCCACC GTCAAAGTAT TAGTCATCTT CGGCATTCTT
TATGGCTACC TAGACAACCA CCTTCAGCCA CTGCTTGGCA TGCAAAACTT ACCACTCAGC
CAAGGCTTCT CGCTAATCAT GTCGATTTTG TTTGAAGGTT TGCTGCTGAT GGGCTTTGCC
CTGTTGTTGT TTGGAGTTCT TGATATTCCT TACCAGCGCT GGGAGCACCT CAAAGAGCTG
CGCATGACCA AACAGGAGCT GAAAGAAGAG TTCAAGAACA ACGAAGGTCG ACCAGAAGTT
AAGCAACGCA TTCGCCAAAT CCAGCAGCAG TTTGCTCGCC GTAAAATCGA CAAGATGGTG
CCCACCGCAG ATGTGGTGAT CACCAACCCG ACTCACTACG CCGTTGCATT GAAATACGAA
CATTCGCTAT CTGATGCACC ATTTGTGGTG GCAAAAGGCG TCGATGAAAC CGCAATGCAC
ATTCAACGCA TCGCCCGCGA GAATAAAGTC GAGATCATCA ACTCGCCTCC GCTGACTCGT
TCGATTTATC ACACCACGGC CATTGAGCAA GCCATACCAA GCCAACTCTA TATCGCGGTG
GCCCATATTT TAACTTACGT TTTGCAGTTG AAAGCCTTTC GTCAAGGGGA CGGAAAGGAA
CCGAAGCCTT TGCCTCATTT TTCAATTCCA AAGCATTTGC AACACTGA
 
Protein sequence
MSEQSSQDKT EKASPQKVKK ARQEGQIPRA KEFTTAVIFL AVAMFFYSQL NSIWESMSGV 
FRYNMTLTKA DLENPKQLVE HLGQSLAVII EMLLPLFTVI IIVAFGSSMV LGGWMFRPAN
VLPKLSKLNP ISGIKRIFST RSVVELVKST VKVLVIFGIL YGYLDNHLQP LLGMQNLPLS
QGFSLIMSIL FEGLLLMGFA LLLFGVLDIP YQRWEHLKEL RMTKQELKEE FKNNEGRPEV
KQRIRQIQQQ FARRKIDKMV PTADVVITNP THYAVALKYE HSLSDAPFVV AKGVDETAMH
IQRIARENKV EIINSPPLTR SIYHTTAIEQ AIPSQLYIAV AHILTYVLQL KAFRQGDGKE
PKPLPHFSIP KHLQH