Gene VIBHAR_04955 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_04955 
Symbol 
ID5558245 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand- 
Start bp212849 
End bp213235 
Gene Length387 bp 
Protein Length128 aa 
Translation table11 
GC content49% 
IMG OID640909434 
Productflagellin-specific chaperone FliS 
Protein accessionYP_001447090 
Protein GI156976184 
COG category[N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1516] Flagellin-specific chaperone FliS 
TIGRFAM ID[TIGR00208] flagellar biosynthetic protein FliS 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTAATGG ATTCCGGCTA CGACTCATAC CAACAGGTCG ATCTGGATGC TCAAGCAGCA 
TCCGCCAACC CACACCAACT CGTTGTCATG CTGATCGACG GGTTGCTCGA TGAAATTGAA 
CGTGTCCGCG GCCATTTGGC TGCCAATCGT CTTGCTGAGA AAGGAATGGG CATTAACAAG 
TGCATGAACA TCCTTATCGG ATTAAGCAGC GCATTGGATG AAGAGAATGG CGGTGAGATC 
GCTGAGAACT TACGTCAGCT CTACGACTTC TGCCAAGTCG AATTGTATTA CACCAGCGTA 
CAGAACGATG CGACACGTTT AGACAATGTA GAGCGCGTAA TGGGTAACAT TCGAGAAGGA 
TGGATGAACT TTGGACAGCA AGCATAA
 
Protein sequence
MLMDSGYDSY QQVDLDAQAA SANPHQLVVM LIDGLLDEIE RVRGHLAANR LAEKGMGINK 
CMNILIGLSS ALDEENGGEI AENLRQLYDF CQVELYYTSV QNDATRLDNV ERVMGNIREG 
WMNFGQQA