Gene VIBHAR_04952 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_04952 
Symbol 
ID5558147 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand- 
Start bp210961 
End bp211470 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content47% 
IMG OID640909431 
Producthypothetical protein 
Protein accessionYP_001447087 
Protein GI156976181 
COG category[N] Cell motility 
COG ID[COG1580] Flagellar basal body-associated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCAAAC AACAAATGAT CGCCCTGTTT ATCGCCATGA TCATCACCAG TGCCCTCGTT 
TCCGCTGCCA CTGTGGTCGG CGGTATTTGG TACCTCAACA AAAGTTCGGA GTCTTCTTCA 
TCAGAGTCAA GCGTGAGCGC CTTCTTGGAG GACTCACCGC TGGCATTCCT AACTTCTGAG 
CAACCAACAA CAAAAGGCCC AAGCTTTCAT CCATTAGATA AAGTGGTGCT GACCATCAAA 
GGCAAGAAGC AAACTCATTT TGTGATGCTA GAACTTGCGG TGGAAACACG CCGCCCAGAG 
CGCATTAAGG ATATTGATGC TTACATGCCG ATGGTTCAAA ACTCGCTGCT AAAACTGTTT 
AGCGACAAAA CCTTTGATGA GCTTCAGCAG GCGGGTGCCA TTGATATCCT ACAAAGCGAA 
GTCAAAGAGA CTCTGCTGCT TGCGTTCGCA AAAACCGACA TCGTTCGTGA TATCGATGAT 
GTTCTGCTAA CCAAGTACGT TGTGCAATAA
 
Protein sequence
MTKQQMIALF IAMIITSALV SAATVVGGIW YLNKSSESSS SESSVSAFLE DSPLAFLTSE 
QPTTKGPSFH PLDKVVLTIK GKKQTHFVML ELAVETRRPE RIKDIDAYMP MVQNSLLKLF 
SDKTFDELQQ AGAIDILQSE VKETLLLAFA KTDIVRDIDD VLLTKYVVQ