Gene VIBHAR_04950 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_04950 
Symbol 
ID5558145 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand
Start bp209352 
End bp210209 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content48% 
IMG OID640909429 
Productflagellar motor protein MotA 
Protein accessionYP_001447085 
Protein GI156976179 
COG category[N] Cell motility 
COG ID[COG1291] Flagellar motor component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAAAGT TTTTTGGAGC CATTACCGTA CTGATGTGTG TCTTCGGCGG ATACATGTGG 
GCAGGCGGTA AACTCGGCGC TATCTGGCAG CCAGCCGAGT TCTTGATCAT CATCGGTGCG
GCAGCAGGTT CACTGATCAT TGGCAACCCG CCACAAGTGT TAAAAGAAAT GCGTCAGCAA
GTACGTGCGA CCATCTCTGG CCCACGTCAA GAGTATGAGT ACTACATGGA GCTGATGGCG
CTGCTTAATA ACCTACTCGA AACCGCACGC AGCCGCGGTT TTAAGTTTCT CGATTCGCAC
ATTGAATCAC CAGAGCAGAG CTCTATTTTC CTCGCTTATC CAAAAGTCAG TAACGATCAT
CGTCTAATTT CTTTCATTAC CGACAATTTA CGTTTAATGG CAATGGGACA AATGTCGCCT
CATGAATTAG AGGGACTGTT AGAACAAGAA ATCGAAGCGA TTCAAACCGA GATGCTTTTG
CCTTCACGCT CCATGCAGCG CACAGCAGAG GCTCTTCCTG GGTTCGGTAT TCTTGCGGCA
GTCGGTGGCA TCATCATCAC CATGCAAGCC ATTGACGGCT CAATTGCATT GATTGGTTAT
CACGTTGCCG CCGCCCTCGT TGGTACATTC ATTGGTATTT TTGGTTGTTA CTGTTGTTTA
GATCCACTCA GTAACGCCAT GGCTCAACGA GTTAGACGAA ACATGACGGC TTTCGAATGT
GTACGCGCCA CTCTGGTTGC TTACGTTACG AAGAAGCCTA CCTTGCTCGC TATCGACGCT
GGCCGTAAAC ACATTCAGTT AGACATCAAA CCAACTTTCA ACCAAATGGA GAAGTGGCTA
GCTGAACAGG AGGGATAA
 
Protein sequence
MQKFFGAITV LMCVFGGYMW AGGKLGAIWQ PAEFLIIIGA AAGSLIIGNP PQVLKEMRQQ 
VRATISGPRQ EYEYYMELMA LLNNLLETAR SRGFKFLDSH IESPEQSSIF LAYPKVSNDH
RLISFITDNL RLMAMGQMSP HELEGLLEQE IEAIQTEMLL PSRSMQRTAE ALPGFGILAA
VGGIIITMQA IDGSIALIGY HVAAALVGTF IGIFGCYCCL DPLSNAMAQR VRRNMTAFEC
VRATLVAYVT KKPTLLAIDA GRKHIQLDIK PTFNQMEKWL AEQEG