| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_04934 |
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| Symbol | |
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| ID | 5558175 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio harveyi ATCC BAA-1116 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009784 |
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| Strand | + |
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| Start bp | 199139 |
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| End bp | 200482 |
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| Gene Length | 1344 bp |
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| Protein Length | 447 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640909413 |
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| Product | TRAP-type C4-dicarboxylate transport system large permease component |
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| Protein accession | YP_001447069 |
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| Protein GI | 156976163 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAGCG TGACACAGTT TATCTCTGAC ATCATTGCTG GAGATCCGGA TATTTATGTC
ATGACCTTCA CCTTAGTCAC GGTGATGGTT ATCCTGCTGT TTCTTAGCTT TCCTATGATC
GTTCCTCTAG CAGTGGGCGC TTTAATTGGT CTCATCCACT TTTCTCAGGT GGAACCCGGT
GTTGTCATTC AGCAGATGGT TACTGGCATT TCGCCCAATG CTTTGATTGC GGTTCCGATG
TTCATCTTGG CTGCGGACAT CATGACCAGA GGGCACACTG CATACAATTT GCTGGGATTA
ATTCAGGCTT TTGTTGGGCA TCTGCGCGGT GGGCTTCCGA TCACAACTTG CATTAGTTGT
ACCTTGTTTG GTTCAGTCTC AGGCTCGACT CAAGCGACCG TTGTATCTGT TGGACAAATC
ATGCGACCTA AGTTGTTGCA AGCAGGGTAC AAAGACAGCT TCGTGATGGC GCTGATCATC
AATGCAAGCT ACATTGCGTT CTTAATCCCA CCAAGTATTG GTCTGATCCT TTATGGCACC
CTCGCCAATG CCAGTGTTGG TGAATTGTTT ATCGCCGGTA TTGGCCCGGG GCTAGTTTTG
GCAGGTCTGT TTTCACTGTA TAGCTATGCC TACAGCGTAA AACACAGTGG CAGCCTTACC
TTGGTAGAGA AAGCCAGCAA AGCGGAAAAG CTGCTCGCGA TTAAACAAGC GATTTTGCCT
CTTGGTTTCC CTGCGTTGAT TATTGGCGGT ATCTATTCTG GTATTGTCAC GCCAACAGAA
GCCGCCTCGT TTGCGGTGCT ATATGCCATT ATTGTTGAAT GCGTTTTGTT CCGAAAACTG
GGCGTCAAAG ACATTTGTGA TGCGGCTTTA AATACAGGGC TGATTACTGC GGTTGTGTTT
GTTTTGGTTG GTATTGGGCA AGCTTTTTCA TGGTACATCT CATTCGAACA AATACCTCAA
GAATTACTTG CACCTCTTGA GCTGGACAAT GCGTCACCAG AATACATCCT GTTTATCATC
GCGTTAACTT TCTTTGTGGG TTGTATGTTT GTCGATTCGC TTGTGGTGTT ACTGATACTC
ACACCGATAT TTATGCCTAT CGTCAATGCC GCAGGAATCG ATCCGATTTT GGTGGGTGTT
ATGGTGACGC TACAAATGGC AATTGGCTCC GCTACCCCTC CTTTCGGTTG CGATATCTTT
ACCGCCATTG CCATCTTTGA AAAGCCGTAT ATGGAAGTCA TACGTGGCAC GTTACCTTTC
TTTCTCATCC TAATATTGAT GTCTGCGTTG CTGATTTTCT TCCCTGATAT CGCCTTGTTA
CCAAGAGACA TTTTGTTCAA CTAA
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| Protein sequence | MSSVTQFISD IIAGDPDIYV MTFTLVTVMV ILLFLSFPMI VPLAVGALIG LIHFSQVEPG
VVIQQMVTGI SPNALIAVPM FILAADIMTR GHTAYNLLGL IQAFVGHLRG GLPITTCISC
TLFGSVSGST QATVVSVGQI MRPKLLQAGY KDSFVMALII NASYIAFLIP PSIGLILYGT
LANASVGELF IAGIGPGLVL AGLFSLYSYA YSVKHSGSLT LVEKASKAEK LLAIKQAILP
LGFPALIIGG IYSGIVTPTE AASFAVLYAI IVECVLFRKL GVKDICDAAL NTGLITAVVF
VLVGIGQAFS WYISFEQIPQ ELLAPLELDN ASPEYILFII ALTFFVGCMF VDSLVVLLIL
TPIFMPIVNA AGIDPILVGV MVTLQMAIGS ATPPFGCDIF TAIAIFEKPY MEVIRGTLPF
FLILILMSAL LIFFPDIALL PRDILFN
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