| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_04924 |
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| Symbol | |
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| ID | 5558453 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio harveyi ATCC BAA-1116 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009784 |
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| Strand | + |
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| Start bp | 190420 |
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| End bp | 191439 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640909403 |
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| Product | isopentenyl pyrophosphate isomerase |
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| Protein accession | YP_001447059 |
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| Protein GI | 156976153 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1304] L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases |
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| TIGRFAM ID | [TIGR02151] isopentenyl-diphosphate delta-isomerase, type 2 |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTCCGC AATCTAATCG CAAAGACTTA CATCTAGACG CTGTTTTACA TCATGACATG
AACATGAAAA GCAAAACGGC GGGCTTTGAG TCTGTCGAGT TTGAGCATTG CGCTTTGCCT
GAATGTGACT TTAACGCCGT CGATCTTTCG AGTGAGTTCC TTGGTCACTC GTTGGCACTG
CCATTTTTGA TCAGTTCAAT GACTGGTGGC GCAAAAGATG CAGAGATCAT CAACTGCCGT
TTGGCAGAAG CCGCGAGTGA AATGGGCATT GCGATGGGGG TTGGCTCGCA GCGAGTGAGC
CTAGAAGACA GCCTTCACTC AGGTTTGGGC AAAACCATTC GTGATCTCGC TAAAGGCGTG
CCTTTGTATT CCAACTTGGG TGCCGCTCAA TTGATGGACA AACAGCGATT CGATAATGCT
CAGCGTGCGG TGGATTTTAT CCAAGCAGAC GCTTTATTCG TGCATCTTAA CCCGATGCAA
GAAGCCTTTC AGCAGAATGG TGATCATGAT TGGATTGGTG TACTTAAATC GATTGAGCAA
CTAAAACAGC GCGTCGATGT ACCGATGATC ATCAAAGAGG TCGGCTTTGG CATCAGTGGC
GTGGTGGCTA AACAACTCGT CGAAGCGGGC GTGGATGCGA TTGATGTCGC GGGCGCTGGT
GGTACAAGTT GGTCTGCAGT TGAGGGTTAC TGTCAGACAG ACAATAAAAT GCAGCGCGCA
GCCGAATTGT TCCGTGATTG GGGCATTCCA ACGGCTAAGT GCTTAGAGCA AATTCGCGGC
CAATACCCTG ACTTACCTTT AATTGCATCT GGTGGCGTGT ATAACGGCTT AGAAGCTGCG
AAAGCGGTAC ATCTTGGCGC CAATCTTGTT GGACAAGCTG GAGCGGTGTT AAAAGCAGCA
ACCATCAGCA CAGAATCTAT CGTCGAACAC TTTGAACAAA TGGCATTAGA GTTGCGTTTA
GCGTGCTTTG GTACAGGTTC TGCGAATCTT CGAGCACTGA CTCAAGCTCG TCGTCTTTAA
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| Protein sequence | MAPQSNRKDL HLDAVLHHDM NMKSKTAGFE SVEFEHCALP ECDFNAVDLS SEFLGHSLAL
PFLISSMTGG AKDAEIINCR LAEAASEMGI AMGVGSQRVS LEDSLHSGLG KTIRDLAKGV
PLYSNLGAAQ LMDKQRFDNA QRAVDFIQAD ALFVHLNPMQ EAFQQNGDHD WIGVLKSIEQ
LKQRVDVPMI IKEVGFGISG VVAKQLVEAG VDAIDVAGAG GTSWSAVEGY CQTDNKMQRA
AELFRDWGIP TAKCLEQIRG QYPDLPLIAS GGVYNGLEAA KAVHLGANLV GQAGAVLKAA
TISTESIVEH FEQMALELRL ACFGTGSANL RALTQARRL
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