Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_04913 |
Symbol | |
ID | 5558192 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009784 |
Strand | + |
Start bp | 177846 |
End bp | 178577 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640909392 |
Product | flagellar basal body rod protein |
Protein accession | YP_001447048 |
Protein GI | 156976142 |
COG category | [N] Cell motility |
COG ID | [COG4787] Flagellar basal body rod protein |
TIGRFAM ID | [TIGR02490] flagellar basal-body rod protein FlgF [TIGR03506] fagellar hook-basal body proteins |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATAGCT TGTTATTTAC TGCCACATCT GGTGCGAGTC GAGTTCTTAA GGCTCAGCAC GTACGTTCGA ACAACTTATC GAACGCTGAC ACCGCAGGTT TCCGTGCCGA TATGGAACGT GTTCGCAGCG TTGAGTTACA AGGTGCGGGC TTCGATGGCC GTACCATGGT GGTGACCAAC TCAGCCGCAA CGCGTTTTGA TTCTGGCGAC ATCATGAAAA CCGGTCGTCC TCTCGATGTG GCGATCATGG GCGAGGGCTA CCTCACCGTT GAAACGCCAA TTGGCAATGA AGCATACACC CGAGCGGGCA ACATCAAAGT CGATACCTTT GGCGCAATGA GCATCAATGG CTTCCCTGTT GTCGGTGAAA ACGGACCAAT CGTTGTACCT GATTTTCAGA AGATTGAAAT CAGTGAACGT GGCCGTGTTT CTGTGATTCC TCCGGGTGGT GGTGCAGAAG TGGAAGTGGG CACTTTGAAG ATGGTGAAAC CAGCAATCAA CCAACTGCAA AAAGAGAGCG ACAGCTTGCT ACATAGCGTA GATGGTGTGC CTTTCCCTGC GGATGAAACC GTGCAGCTTT CTCCAGAGCA CATTGAGGGC AGTAACGTGT CTGCCATTGA TGAGTTGCTG AGCGTGATGT CGTTGACACG TAACTTCGAA ATGCAAGTTC GCATGATGAA AACCGCAGAA ACCTTGGCGC AAGCCGGAAA CAAATTGATG GCGGCGAGAT AA
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Protein sequence | MDSLLFTATS GASRVLKAQH VRSNNLSNAD TAGFRADMER VRSVELQGAG FDGRTMVVTN SAATRFDSGD IMKTGRPLDV AIMGEGYLTV ETPIGNEAYT RAGNIKVDTF GAMSINGFPV VGENGPIVVP DFQKIEISER GRVSVIPPGG GAEVEVGTLK MVKPAINQLQ KESDSLLHSV DGVPFPADET VQLSPEHIEG SNVSAIDELL SVMSLTRNFE MQVRMMKTAE TLAQAGNKLM AAR
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