Gene VIBHAR_04913 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_04913 
Symbol 
ID5558192 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand
Start bp177846 
End bp178577 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content51% 
IMG OID640909392 
Productflagellar basal body rod protein 
Protein accessionYP_001447048 
Protein GI156976142 
COG category[N] Cell motility 
COG ID[COG4787] Flagellar basal body rod protein 
TIGRFAM ID[TIGR02490] flagellar basal-body rod protein FlgF
[TIGR03506] fagellar hook-basal body proteins 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATAGCT TGTTATTTAC TGCCACATCT GGTGCGAGTC GAGTTCTTAA GGCTCAGCAC 
GTACGTTCGA ACAACTTATC GAACGCTGAC ACCGCAGGTT TCCGTGCCGA TATGGAACGT
GTTCGCAGCG TTGAGTTACA AGGTGCGGGC TTCGATGGCC GTACCATGGT GGTGACCAAC
TCAGCCGCAA CGCGTTTTGA TTCTGGCGAC ATCATGAAAA CCGGTCGTCC TCTCGATGTG
GCGATCATGG GCGAGGGCTA CCTCACCGTT GAAACGCCAA TTGGCAATGA AGCATACACC
CGAGCGGGCA ACATCAAAGT CGATACCTTT GGCGCAATGA GCATCAATGG CTTCCCTGTT
GTCGGTGAAA ACGGACCAAT CGTTGTACCT GATTTTCAGA AGATTGAAAT CAGTGAACGT
GGCCGTGTTT CTGTGATTCC TCCGGGTGGT GGTGCAGAAG TGGAAGTGGG CACTTTGAAG
ATGGTGAAAC CAGCAATCAA CCAACTGCAA AAAGAGAGCG ACAGCTTGCT ACATAGCGTA
GATGGTGTGC CTTTCCCTGC GGATGAAACC GTGCAGCTTT CTCCAGAGCA CATTGAGGGC
AGTAACGTGT CTGCCATTGA TGAGTTGCTG AGCGTGATGT CGTTGACACG TAACTTCGAA
ATGCAAGTTC GCATGATGAA AACCGCAGAA ACCTTGGCGC AAGCCGGAAA CAAATTGATG
GCGGCGAGAT AA
 
Protein sequence
MDSLLFTATS GASRVLKAQH VRSNNLSNAD TAGFRADMER VRSVELQGAG FDGRTMVVTN 
SAATRFDSGD IMKTGRPLDV AIMGEGYLTV ETPIGNEAYT RAGNIKVDTF GAMSINGFPV
VGENGPIVVP DFQKIEISER GRVSVIPPGG GAEVEVGTLK MVKPAINQLQ KESDSLLHSV
DGVPFPADET VQLSPEHIEG SNVSAIDELL SVMSLTRNFE MQVRMMKTAE TLAQAGNKLM
AAR