Gene VIBHAR_04911 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_04911 
SymbolflgD 
ID5558103 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand+ 
Start bp175921 
End bp176607 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content49% 
IMG OID640909390 
Productflagellar basal body rod modification protein 
Protein accessionYP_001447046 
Protein GI156976140 
COG category[N] Cell motility 
COG ID[COG1843] Flagellar hook capping protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTCTCG CACAATACAC TGCGCTCTCT TCTGACGCAC CAGTCGCAAC GACCGCTAGT 
GGCGATACGG GCGGCATTTC AGCGAACCCA TCGGATATGA ACAGCGCAAC GTCACTGCAA 
AACGAGTTTA TCTCGCTCAT GGTGGCGCAA ATTCAAAACC AAGATCCACT TAACCCGCTT 
GATGGCACTG AGTATGTCAG CCAGCTAGCG CAATTTTCGC AAGTTCAAAG TACTGAAAAC 
ATGTCGATGT TGATGCAAAA CAGCATGGTA TTGCTCGACA ACATGCAGGT GCTTTCAACT 
GCGGGGTTGG TTGGTCAAAC CGTGTATGTC TCTTCAAACG AGTTTGAACT TGGTGAAGGC 
GTGCAAAGTG GCAAGGTTGA GCTAGAACAT GGTTCGAACC AAGTGACGTT AGTCGTCAAA 
GATGAGTTCG GCCAATCAAC CAAAGTGCCT TTAGGCGCAC ACGGTGCGGG TGACGTCGAG 
TTCTCTATCA ATCCTGAAGA GCTTGGTTTG AAACCGGGTA AATACACCGT TGCGGTGGAA 
GTTCAAGAAG GGCAAAAGAG CCCAAATGTT TTGCTGGCAG GCACGGTTGA GCAGGTACGT 
ATTCCTAGCT CGGGTGGCGC AGCACTGGTC AATGTTCAAG GCGTTGGCAA CGTTCCTTTC 
TATCAAATCA CTCAGTTTGG TGCTTAA
 
Protein sequence
MSLAQYTALS SDAPVATTAS GDTGGISANP SDMNSATSLQ NEFISLMVAQ IQNQDPLNPL 
DGTEYVSQLA QFSQVQSTEN MSMLMQNSMV LLDNMQVLST AGLVGQTVYV SSNEFELGEG 
VQSGKVELEH GSNQVTLVVK DEFGQSTKVP LGAHGAGDVE FSINPEELGL KPGKYTVAVE 
VQEGQKSPNV LLAGTVEQVR IPSSGGAALV NVQGVGNVPF YQITQFGA