| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_04893 |
|---|
| Symbol | |
|---|
| ID | 5558309 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio harveyi ATCC BAA-1116 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009784 |
|---|
| Strand | + |
|---|
| Start bp | 161425 |
|---|
| End bp | 162294 |
|---|
| Gene Length | 870 bp |
|---|
| Protein Length | 289 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640909372 |
|---|
| Product | transcriptional regulator |
|---|
| Protein accession | YP_001447028 |
|---|
| Protein GI | 156976122 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAAACC TACCGCCATT AAATTCTCTG AAAGCGTTTG AAGCGACCGC CCGATTGCAA
AGCTTCACCA AGGCGGCAGA GGAGCTCAAT GTCACCCGTG CGGCGGTGAG TCAGCAAGTT
AAATCCCTCG AAGCGTATTT GGATGCCACC TTATTTGAAC GCAATGGCGC CCAGCTCAAT
CTGACTCAAG CAGCTCATGA ATATTTACCT GTGGTAAGTC ATGTTTTCCA AAGCTTGTCT
GCGGCAACTC AGCACCTGTT CTCTAGACAA CAACAAGCAC AACTGACGTT ACATGTGGCA
CACAGCTTCT GCTCTCAATG GCTCATGCCG CGATTGGCAG ACTTTCACCG TCAACATCCT
AAAATCAGCT TCAAAGTTTC TACTACGGCT AACGCGATGC CAAGTAACAG CGATATTGCG
GATGTGGAGA TCATCAATGG TTATGGAGAG TGGCAAAGTC AAAAAGCGAT TCAACTGACG
CGAGAAAACT GGATCGTTGT AGCAAGCCCA GGTTTTTTGC ATCTCAATCC TGTCCGTGAT
TTGGCCGATT TGATTCGCTT ACCAAAGCTC GCGACGGGTG GCTATCAGGA AACTTGGCAA
TGTTGGCTGG AACAGCAAGG ATATCAAGGC ACAAGCATAA AACTAACGGG GGAATTCGAG
CACTCCTTGC TCGCCATTGA AGCGGCTGTG AATCAGCTTG GCGTGTTGTT GGTGCGTGAT
TTGCTCGTTG AAGACCACTT GCAGCAAGGC ACATTAGTGA AAGTTGGTGA GTGGTCGATG
CCAAGTCGAG GAGCTCATCA CATGATCATT CGAGATGAAG AAAAGCCTCA TGTGAAAGCT
TTTGTTGATT GGATTATGCA AAGTTTATAA
|
|---|
| Protein sequence | MQNLPPLNSL KAFEATARLQ SFTKAAEELN VTRAAVSQQV KSLEAYLDAT LFERNGAQLN
LTQAAHEYLP VVSHVFQSLS AATQHLFSRQ QQAQLTLHVA HSFCSQWLMP RLADFHRQHP
KISFKVSTTA NAMPSNSDIA DVEIINGYGE WQSQKAIQLT RENWIVVASP GFLHLNPVRD
LADLIRLPKL ATGGYQETWQ CWLEQQGYQG TSIKLTGEFE HSLLAIEAAV NQLGVLLVRD
LLVEDHLQQG TLVKVGEWSM PSRGAHHMII RDEEKPHVKA FVDWIMQSL
|
|---|
| |