Gene VIBHAR_04839 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_04839 
Symbol 
ID5556671 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand- 
Start bp106086 
End bp107162 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content47% 
IMG OID640909318 
Productribosome-associated GTPase 
Protein accessionYP_001446975 
Protein GI156976069 
COG category[R] General function prediction only 
COG ID[COG1162] Predicted GTPases 
TIGRFAM ID[TIGR00157] ribosome small subunit-dependent GTPase A 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAAAA CACATTCTTT TTGTGAAACA CTACTAACTC AGCCTAACCC ATTAAAGCGA 
TTAGGTTGGA AACCATTTTT TCAACAACAA CTGACGTTAG ACGATTACGA GAACACGCTT 
TTCGCGCGAG TGATTGCTCA CCATCGTAGT GGTTACGTTG TGGTTAGCGA GCAAGGCGAA 
ACTCACTTAC CTATCCAAAC ATCACTACCC AGCATGACCG TTGGCGATTG GGCAATATTA 
AACCACCAGC AGCAGTTCTC TCGTTTACTC GAGCGTCGCA GCTTATTTAG CCGTAAAGCC 
GCAGGTAGCA AGGTCGCTGA GCAGCTTATC GCCGCCAACA TAGACACAGT ATTTATCGTT 
TGTTCACTCA ACCACGACTT TAACCTGAGC CGCATTGAAC GTTACTTATC ACTCGTTAAT 
GAAGCCGACG TCGAGCCTGT TATTGTGCTA ACGAAAGCAG ACTTATGCGA GGGTGCTGAC 
GAACTCAAGG CTCAAGTACA AAAACTCGAT CCGCTGCTTA TGGTGGAAAG CGTGAATGGT 
CTGGACGAAT CAAGCGTTGC TACGTTGATG AGTTGGTGCA GCGAAGGTCA AACCGTCGCG 
TTCATCGGCT CTTCAGGAGT AGGAAAGTCC ACCTTGGTGA ACACTCTACT TGGCGAGCAA 
GAACAAGCGA CAGGTGGTAT TCGTGAAGAT GATAGCAAAG GTCGACACAC TACGACCTCT 
CGTTCAATCC ATCTACTGCC CTCTGGTGCA ATCCTCATGG ATACACCAGG AATGCGTGAG 
ATCCAGTTGG CAGATAGTGA AACAGGGGTC AGCGAAACCT TTGCTGATAT TGAAGCGCTA 
GCAGAAGACT GCCGATTCAA TGATTGCCAA CATCAAACCG AACCTGGATG TGCAGTTCAA 
GCCGCGATTG AAGGTGGTTC ATTGGATTCG CGCCGCTTTA CTAACTATCA AAAGTTATTA 
CGCGAGCAAG CTCATAATGG TGCAACACTT GCAAAACAGC GAGCGCAGAA CAAACAGTTT 
GGCAAAATGG TACGTAGCGT GGTCGGCGAA AAGCGCAAAC GACAACAAGG TTACTAG
 
Protein sequence
MNKTHSFCET LLTQPNPLKR LGWKPFFQQQ LTLDDYENTL FARVIAHHRS GYVVVSEQGE 
THLPIQTSLP SMTVGDWAIL NHQQQFSRLL ERRSLFSRKA AGSKVAEQLI AANIDTVFIV 
CSLNHDFNLS RIERYLSLVN EADVEPVIVL TKADLCEGAD ELKAQVQKLD PLLMVESVNG 
LDESSVATLM SWCSEGQTVA FIGSSGVGKS TLVNTLLGEQ EQATGGIRED DSKGRHTTTS 
RSIHLLPSGA ILMDTPGMRE IQLADSETGV SETFADIEAL AEDCRFNDCQ HQTEPGCAVQ 
AAIEGGSLDS RRFTNYQKLL REQAHNGATL AKQRAQNKQF GKMVRSVVGE KRKRQQGY