Gene VIBHAR_04838 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_04838 
Symbol 
ID5556670 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand
Start bp104504 
End bp105727 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content47% 
IMG OID640909317 
Productserine/threonine transporter SstT 
Protein accessionYP_001446974 
Protein GI156976068 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3633] Na+/serine symporter 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAATGC AACACAACAG TCTCGTTGCC CGATACGCTC GCGGTAACCT CGTTCTCCAA 
ATCCTTGTCG GTATCGTCTT TGGTATCTTG CTTGCAACGA TCTCACCAAG CCACGCTGAA
AGCGTTGGTA TGCTGGGTAG TCTATTTGTA GGTGCGCTAA AAGCGATTGC TCCAATATTG
GTATTCATCT TGGTTGCTGC GTCTATCGCG AACCAAAAGA AAAACCAACA CACTTACATG
CGTCCAATCG TAGTTCTTTA CCTAGCGGGC ACTTTCTTTG CAGCATTAAC CGCAGTGTTA
CTAAGCTTCC TTTTCCCGAC CAATCTAACG CTAGTAACGG GCGCTGAAGG TGCAACGCCA
CCACAAGGTA TTGCAGAAGT TATCCAAACC TTGTTGTTCA AACTGGTTGA TAACCCAGTA
AACGCGCTAG TAGAAGCAAA CTACATCGGT ATTCTTGCTT GGGGTGTGGG TCTGGGTCTT
GCACTTCACC ACGCATCAGC AACGACAAAA GCGGTATTCG AAGATCTAAG CCACAGTGTT
TCTCACATTG TTCGCTTTAT CATTCGTCTT GCTCCTTTCG GTATCTTCGG TTTGGTTGCA
TCTACATTTG CAACAACTGG TTTTGGCGCG CTAGCGAGCT ACGCTCATCT TCTAGCGGTA
CTATTGGGTT CAATGTTTAT CATTGCACTA GTGGTTAACC CAGCGATCGT ATACTTCAAA
ACGAAAGAAA ACCCATACCC ATTGGTGTTC CAATGTCTAC GTGAAAGTGG CGTAACGGCA
TTCTTTACGC GTTCAAGTGC TGCGAACATT CCAGTGAACA TGAACCTGTG TAAGAAGCTA
GACCTAGACG AAGATACGTA CTCAGTGTCT ATCCCACTAG GTGCGACCAT TAACATGGCG
GGTGCAGCAA TCACTATCAC TACCCTAACG CTAGCAGCGG TACACACTAT GGGTATCGAA
GTTGACCTAA TGACGGCAGT ACTACTAAGT GTTGTTGCAG CGGTATCAGC GTGTGGCGCA
TCAGGTGTTG CAGGTGGTTC TCTACTACTT ATCCCACTAG CATGTGGTCT GTTTGGTATC
TCAAACGACG TAGCAATGCA GGTTGTAGCG GTTGGCTTCA TCATCGGTGT GATTCAAGAC
TCGGCTGAAA CAGCGCTAAA CAGCTCAACA GACGTTATCT TCACTGCCGC TGTTTGCAAA
TCAGAACAGC AAAAAGCTCA GTAA
 
Protein sequence
MQMQHNSLVA RYARGNLVLQ ILVGIVFGIL LATISPSHAE SVGMLGSLFV GALKAIAPIL 
VFILVAASIA NQKKNQHTYM RPIVVLYLAG TFFAALTAVL LSFLFPTNLT LVTGAEGATP
PQGIAEVIQT LLFKLVDNPV NALVEANYIG ILAWGVGLGL ALHHASATTK AVFEDLSHSV
SHIVRFIIRL APFGIFGLVA STFATTGFGA LASYAHLLAV LLGSMFIIAL VVNPAIVYFK
TKENPYPLVF QCLRESGVTA FFTRSSAANI PVNMNLCKKL DLDEDTYSVS IPLGATINMA
GAAITITTLT LAAVHTMGIE VDLMTAVLLS VVAAVSACGA SGVAGGSLLL IPLACGLFGI
SNDVAMQVVA VGFIIGVIQD SAETALNSST DVIFTAAVCK SEQQKAQ