Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_04827 |
Symbol | |
ID | 5556765 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009784 |
Strand | + |
Start bp | 89717 |
End bp | 91336 |
Gene Length | 1620 bp |
Protein Length | 539 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640909306 |
Product | ribonuclease |
Protein accession | YP_001446963 |
Protein GI | 156976057 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2356] Endonuclease I |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATCCA TAACGAAAAC CCTCTACCTC TTACCTCTCA TTTGCTCTCC AATTGCCTAT GCTGAGGTAT TGAATGGAGA CTTTGAACAA TGGAATGGGA ATGCGCCAGC GCAGTGGTCT GTGATTGATT CTGGTATTGC CGTTTCACCA ACTAGCAATC CGCATAACTC AGGTGGCCTT GCGGCTCAAG TGATTGTAAA TACAGGTACC CAAAGCAACA CCGACTTTTT GCAAACCATT AATGTGGAGC AGGGGAAAAC CTACCCATTT TCAGTCTCGG TTTACCATAC TGAAGGTAAT GTTAAAGCGC GTTTGGTGGT CGATGGATAC CACGGTTACT CTAACCCTCA GCAAACCAAT CAGTGGCAAC AAATCACCCA TAGCTACACT GCATCATTTA ACAAAACGAT CAATGTCGGG TTACGCTTTT ACGATGAATC TGGCTTTGAT GGTTCCGAAG TTGTTTATGT CGATAACTTT CAGCCAAACC AAAATGGTGG CACTCAGCCG CCAGTAGAAA GCTGTAATGA CAACGAAGTT TTACTGACAT TGAACACCGA CAGTTATGGC TCAGAAACCA GCTGGGAACT GAAAGATAGC CAGTCACAAG TTCTGTTTAC AGGCCAAGGT TTTGAATCTT CGAAAACCTA CGAAAAAACC ATGTGCTTAA CGAATGGTGA CTACCAATTT ACGATCAGTG ATAGCTATGG TGATGGCATT TGTTGTAGTA ACGGTAATGG TTCATACACC TTAATGTTCG GTCAAACCAC GTTAGCATCT GGTGGTGAAT TCACGAAATC TCAAACCACA AGCTTTACTC TTGGTGGTTC AACGACGCCT CCGCCTGTTG TGGGGGAATA CTATAAAGCC GCAGAAGGCA AAACAGGTTT TGAGTTGAAA ACAGCGCTGT TTAACATCAT CAAGGATCAC ACAGGACGCG GTTACTCTGC CATTTGGACC TTAGTAAAAG ACGCGGACAT AGACAACTAC TACGAGAAAG ACGGCTCTAT TCTCGATATG TATTCTGAAA AGCCATCTGG TAGCGATACA GTAAGTTTTA CCAAAGTCAC AGACCAATGT GGTCAATACA GAACTGAAGG TGATTGCTAC AACCGTGAGC ACTCACTTCC TAAGAGCTGG TTTGGTGGCA AGGTTGAACC GATGAACTCG GATGGTCACC ACTTGTTTGC AACCGATGGC TATGTGAATG CGAAGCGCAG CAACTGGCCA TTTGGTGAAG TGGGTAACAG CACTTACGTA TCAAGCAATG GCTCAAAAGT TGGTTTAGCA AGCTCTACTT TGGGCTATTC AGGAACGGTA TTTGAGCCTA TTGATGAGTT CAAAGGTGAT TTTGCTCGTG CGTATTTCTA CATGGCGACA CGCTATGAAA ACGTCATCGG CAACTGGGAA AGCAACTCTA GCAACTCTGA CGCGGTATTG AACGGCACGA AAACGACTGT CTTTGAACCA TGGATGCTGA ACATGTTGAA ACGTTGGCAC AAAAACGATC CAGTCAGCGC GAAAGAGATC AGCCGTAACC AAGCGGTGTT TGAATTCCAA GGTAACCGCA ACCCGTTTGT GGATCACCCT GAGTTTGTAG AGATCATTTG GGGAAACTAA
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Protein sequence | MKSITKTLYL LPLICSPIAY AEVLNGDFEQ WNGNAPAQWS VIDSGIAVSP TSNPHNSGGL AAQVIVNTGT QSNTDFLQTI NVEQGKTYPF SVSVYHTEGN VKARLVVDGY HGYSNPQQTN QWQQITHSYT ASFNKTINVG LRFYDESGFD GSEVVYVDNF QPNQNGGTQP PVESCNDNEV LLTLNTDSYG SETSWELKDS QSQVLFTGQG FESSKTYEKT MCLTNGDYQF TISDSYGDGI CCSNGNGSYT LMFGQTTLAS GGEFTKSQTT SFTLGGSTTP PPVVGEYYKA AEGKTGFELK TALFNIIKDH TGRGYSAIWT LVKDADIDNY YEKDGSILDM YSEKPSGSDT VSFTKVTDQC GQYRTEGDCY NREHSLPKSW FGGKVEPMNS DGHHLFATDG YVNAKRSNWP FGEVGNSTYV SSNGSKVGLA SSTLGYSGTV FEPIDEFKGD FARAYFYMAT RYENVIGNWE SNSSNSDAVL NGTKTTVFEP WMLNMLKRWH KNDPVSAKEI SRNQAVFEFQ GNRNPFVDHP EFVEIIWGN
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