Gene VIBHAR_04827 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_04827 
Symbol 
ID5556765 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand
Start bp89717 
End bp91336 
Gene Length1620 bp 
Protein Length539 aa 
Translation table11 
GC content45% 
IMG OID640909306 
Productribonuclease 
Protein accessionYP_001446963 
Protein GI156976057 
COG category[L] Replication, recombination and repair 
COG ID[COG2356] Endonuclease I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATCCA TAACGAAAAC CCTCTACCTC TTACCTCTCA TTTGCTCTCC AATTGCCTAT 
GCTGAGGTAT TGAATGGAGA CTTTGAACAA TGGAATGGGA ATGCGCCAGC GCAGTGGTCT
GTGATTGATT CTGGTATTGC CGTTTCACCA ACTAGCAATC CGCATAACTC AGGTGGCCTT
GCGGCTCAAG TGATTGTAAA TACAGGTACC CAAAGCAACA CCGACTTTTT GCAAACCATT
AATGTGGAGC AGGGGAAAAC CTACCCATTT TCAGTCTCGG TTTACCATAC TGAAGGTAAT
GTTAAAGCGC GTTTGGTGGT CGATGGATAC CACGGTTACT CTAACCCTCA GCAAACCAAT
CAGTGGCAAC AAATCACCCA TAGCTACACT GCATCATTTA ACAAAACGAT CAATGTCGGG
TTACGCTTTT ACGATGAATC TGGCTTTGAT GGTTCCGAAG TTGTTTATGT CGATAACTTT
CAGCCAAACC AAAATGGTGG CACTCAGCCG CCAGTAGAAA GCTGTAATGA CAACGAAGTT
TTACTGACAT TGAACACCGA CAGTTATGGC TCAGAAACCA GCTGGGAACT GAAAGATAGC
CAGTCACAAG TTCTGTTTAC AGGCCAAGGT TTTGAATCTT CGAAAACCTA CGAAAAAACC
ATGTGCTTAA CGAATGGTGA CTACCAATTT ACGATCAGTG ATAGCTATGG TGATGGCATT
TGTTGTAGTA ACGGTAATGG TTCATACACC TTAATGTTCG GTCAAACCAC GTTAGCATCT
GGTGGTGAAT TCACGAAATC TCAAACCACA AGCTTTACTC TTGGTGGTTC AACGACGCCT
CCGCCTGTTG TGGGGGAATA CTATAAAGCC GCAGAAGGCA AAACAGGTTT TGAGTTGAAA
ACAGCGCTGT TTAACATCAT CAAGGATCAC ACAGGACGCG GTTACTCTGC CATTTGGACC
TTAGTAAAAG ACGCGGACAT AGACAACTAC TACGAGAAAG ACGGCTCTAT TCTCGATATG
TATTCTGAAA AGCCATCTGG TAGCGATACA GTAAGTTTTA CCAAAGTCAC AGACCAATGT
GGTCAATACA GAACTGAAGG TGATTGCTAC AACCGTGAGC ACTCACTTCC TAAGAGCTGG
TTTGGTGGCA AGGTTGAACC GATGAACTCG GATGGTCACC ACTTGTTTGC AACCGATGGC
TATGTGAATG CGAAGCGCAG CAACTGGCCA TTTGGTGAAG TGGGTAACAG CACTTACGTA
TCAAGCAATG GCTCAAAAGT TGGTTTAGCA AGCTCTACTT TGGGCTATTC AGGAACGGTA
TTTGAGCCTA TTGATGAGTT CAAAGGTGAT TTTGCTCGTG CGTATTTCTA CATGGCGACA
CGCTATGAAA ACGTCATCGG CAACTGGGAA AGCAACTCTA GCAACTCTGA CGCGGTATTG
AACGGCACGA AAACGACTGT CTTTGAACCA TGGATGCTGA ACATGTTGAA ACGTTGGCAC
AAAAACGATC CAGTCAGCGC GAAAGAGATC AGCCGTAACC AAGCGGTGTT TGAATTCCAA
GGTAACCGCA ACCCGTTTGT GGATCACCCT GAGTTTGTAG AGATCATTTG GGGAAACTAA
 
Protein sequence
MKSITKTLYL LPLICSPIAY AEVLNGDFEQ WNGNAPAQWS VIDSGIAVSP TSNPHNSGGL 
AAQVIVNTGT QSNTDFLQTI NVEQGKTYPF SVSVYHTEGN VKARLVVDGY HGYSNPQQTN
QWQQITHSYT ASFNKTINVG LRFYDESGFD GSEVVYVDNF QPNQNGGTQP PVESCNDNEV
LLTLNTDSYG SETSWELKDS QSQVLFTGQG FESSKTYEKT MCLTNGDYQF TISDSYGDGI
CCSNGNGSYT LMFGQTTLAS GGEFTKSQTT SFTLGGSTTP PPVVGEYYKA AEGKTGFELK
TALFNIIKDH TGRGYSAIWT LVKDADIDNY YEKDGSILDM YSEKPSGSDT VSFTKVTDQC
GQYRTEGDCY NREHSLPKSW FGGKVEPMNS DGHHLFATDG YVNAKRSNWP FGEVGNSTYV
SSNGSKVGLA SSTLGYSGTV FEPIDEFKGD FARAYFYMAT RYENVIGNWE SNSSNSDAVL
NGTKTTVFEP WMLNMLKRWH KNDPVSAKEI SRNQAVFEFQ GNRNPFVDHP EFVEIIWGN