| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_04820 |
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| Symbol | |
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| ID | 5558592 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio harveyi ATCC BAA-1116 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009784 |
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| Strand | - |
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| Start bp | 82177 |
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| End bp | 84225 |
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| Gene Length | 2049 bp |
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| Protein Length | 682 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640909299 |
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| Product | glycogen operon protein GlgX |
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| Protein accession | YP_001446956 |
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| Protein GI | 156976050 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1523] Type II secretory pathway, pullulanase PulA and related glycosidases |
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| TIGRFAM ID | [TIGR02100] glycogen debranching enzyme GlgX |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGTTGACC TTATTAGGAC AAAGTTTTTT ACTTATAGTT TCTTAAAGGT AGCTATAAAA
TTAAAAAAAG ATTCGCTGAT GACACAACTT CACTCTCGCC CATACCCACT CGGCGCAACT
GTGAGTACAG AAGGTTGTAA CTTCTCTATT CATGCTCCGA GTAGTAAAGA CATTCAACTT
GCGCTATTTG CGGAAGACGG TACCTATACA CTGCACGACT TGTCAGGCGA ATACGCAGGC
ATTCGTCATA CTTTCATCCC AGACATTAAA CCTGGACAGA AGTATGGCTA TATAGTGACA
CATCAAGGCC AACCTTTGCT GATCTCCGAT CCTTACGCAA AGTCGATTGA TAAAGCCCTT
CACTACCAAC CTCCCTTCTC CCCTATAAAA AGCTTTGATA TGCCCAAATG TGTTGTGCTT
GAAGACAACT TCGATTGGCA AGACACCGAT CATCCGCGCA TACCGCGTGA AGAGATGGTG
CTATTCGAAA CCCATGTGAA AGGGTTAACT CAACAGCACC CAGAGGTCGC CAGTGATACC
AAAGGCCGTT ATTTAGGGTT GTCTTCGCCA GAAATGCTGG CGTTCTTCAA ACAGCAAAAC
ATCAATACGC TGCAATTGCT ACCCGTGGCA GCGTGTATGC ATGAGACTCA CTTGCTCAAG
ATGGATAAAG TGAACTATTG GGGTTACAAC CCATACTTGT TCATGGTGCC AGATCCTCGC
TATGCAGAAA AAGACGCGGT GACCGAACTC AAAACCACCA TCCGCGAGCT GCATAAACAC
GGCATCGAAG TGATTCTTGA TGTGGTGTAT AACCACACGG CGGAAGGCGG TGAAGGGTCT
ACTATCTTCA ACTTAAAAGC ACTCGATTCA CGATTCTATA TCAAACATGG TCAGCACTTC
GCGAACTTTA CTGGTTGTGG CAACACAGTC GACTTAACTT ACCAGCCAGC AATGAATCTC
GTTATGGATA CACTGCGATA CTGGGTGAGC GAATTTAAAG TTGATGGTTT CCGTTTTGAC
TTGGCAGCAA CGCTAGGTCG CCAAGGCGAC AATTACAACC CTGAAGCGGC CTTCTTTAAA
GCGGTTGCAC AAGACCCCAC TCTTCGCGAA ACCAAGCTGA TTGCAGAGCC TTGGGACATC
GGTCCTAACG GTTACCAAGT GGGTAACTTC CCATTTGGTT GGAACGAATG TAACGATAAA
CTTCGCGACA TCTCCCGCAG CTTCTGGCGC GGTGACCAAG GCTACCTAAA AGAATTTGCG
ACTCGTTTGA TGGGCTCTCG TGATATCTAC AGCGCAGCAA ACTGGCCTCA CAAACTCACG
GTCAACTACA TCACATATCA CGATGGTTTC ACCTTGCAAG ATCTCGTGTC TTACAAACAC
AAGCACAACG AAGCGAACGG TGAGGAAAAC CGCGACGGCC ACGGCGACAA CCGCTCTGAA
AACTACGGCG TGGAAGGCGA AACCGAAAAT CTGATGATCA TCGCCACTCG TGAAAAACAA
AAGCGCAACT TAATGGCGAG CTTGCTGTTT GCATTTGGTA TCCCTCATAT TCTGACCGCG
GATGTTTTGT CGCACACGCA AGGCGGTAAC AACAATGCTT ACTGTCAGGA TAACGAAACC
AGCTGGTTGA ACTGGACGAA GTCTGAGCGC AAGGAAGATT TCAAAGCATG GATTTCACAA
ATGGTGGCAA ACCGTAATCA GTATATGGTG CCATTCATTC GCGCTTTTAG TGGTGAAAAT
CGTAATAACA ACCGCATCTT CTGGCGTCGC ATTAATGGTA GCTTGATGGA ACACGACGAT
TGGAACCGTT TAAGCTCGGT AGCGCTGCAT CTAGGGATTG GTAAAGAGGG GCAAGAGTTG
GTGTACTTGA TCAACCAAAC CAACGCGCCA GCGTGTTTCA AGCTGCCAAG TGAGCGTGGT
CAAGAGTGGG TGACCGTGTG TGATACCAAT GTACGCAACC TAAACCCAGG TCATGCAGAG
GGCGAGGTAC TGCTTTCTCC GACTTCGATG GCTATTTTAC ATTATCAGCC AACCAAAAAG
CTTAGCTGA
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| Protein sequence | MVDLIRTKFF TYSFLKVAIK LKKDSLMTQL HSRPYPLGAT VSTEGCNFSI HAPSSKDIQL
ALFAEDGTYT LHDLSGEYAG IRHTFIPDIK PGQKYGYIVT HQGQPLLISD PYAKSIDKAL
HYQPPFSPIK SFDMPKCVVL EDNFDWQDTD HPRIPREEMV LFETHVKGLT QQHPEVASDT
KGRYLGLSSP EMLAFFKQQN INTLQLLPVA ACMHETHLLK MDKVNYWGYN PYLFMVPDPR
YAEKDAVTEL KTTIRELHKH GIEVILDVVY NHTAEGGEGS TIFNLKALDS RFYIKHGQHF
ANFTGCGNTV DLTYQPAMNL VMDTLRYWVS EFKVDGFRFD LAATLGRQGD NYNPEAAFFK
AVAQDPTLRE TKLIAEPWDI GPNGYQVGNF PFGWNECNDK LRDISRSFWR GDQGYLKEFA
TRLMGSRDIY SAANWPHKLT VNYITYHDGF TLQDLVSYKH KHNEANGEEN RDGHGDNRSE
NYGVEGETEN LMIIATREKQ KRNLMASLLF AFGIPHILTA DVLSHTQGGN NNAYCQDNET
SWLNWTKSER KEDFKAWISQ MVANRNQYMV PFIRAFSGEN RNNNRIFWRR INGSLMEHDD
WNRLSSVALH LGIGKEGQEL VYLINQTNAP ACFKLPSERG QEWVTVCDTN VRNLNPGHAE
GEVLLSPTSM AILHYQPTKK LS
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