| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_04817 |
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| Symbol | |
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| ID | 5556611 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio harveyi ATCC BAA-1116 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009784 |
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| Strand | + |
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| Start bp | 80179 |
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| End bp | 81549 |
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| Gene Length | 1371 bp |
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| Protein Length | 456 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640909296 |
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| Product | L-serine deaminase |
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| Protein accession | YP_001446953 |
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| Protein GI | 156976047 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1760] L-serine deaminase |
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| TIGRFAM ID | [TIGR00720] L-serine dehydratase, iron-sulfur-dependent, single chain form |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGTCCA TCTTTGATAT TTACAAGATT GGTGTGGGCC CTTCTAGCTC TCATACTAAT
GGCCCAATGA TCGCGGGTTA TCACTTCACT CGTTTGATTG AATCGAACTT GGCAAAAGTG
GTTCGTATTC AAGTTGATTT ATACGGTTCA CTCTCGCTAA CGGGGATTGG TCACCATACT
GACCGTGCAA CGATTTTGGG TCTATTGGGT AATAAACCAG ATACCATCAA AATCGCCTCT
GCGAACAAAG CGATGCGCAA GGCGATTGAA GAGGGCATGA TGTCTGTCGA TGGCCGTTAT
GAAATCGAAT TCAACTACAA AACGGATATG TTATTCCATG AAGAGAACCT TCCTCTGCAT
GAGAATGGCA TGACGATTAC TGCGTTAGAT GCGCATGGCA ATCAGGTTGG TTTTGAAACT
TACTACTCTA TCGGTGGTGG TTTCATCGCA ACGGCGGATG AACTGCAAAA TGGCCGTGCA
ACCACTCCCA TAGAAGTTGA GTTTCCATTC GCTAGTGCGG ATGAAATGTT GGCACTGGCA
GATAAGAGCG GCATGAGCCT CGGCGGCATG ATTCTGAAAA ACGAACAATC GTTTCAGGAT
ATGGAAGCCA TCAATCAACG GGCAGAACAG ATATGGCGTG TGATGACGCG TTGCATGGAG
CGCGGTTTCG ACACTGAGGG TATATTGGAA GGAGGCTTGA ACGTGACCCG TCGTGCACCA
AACTTGCTGA AGAAGCTTGA AGCAAATGCA TCAATCGAAA ACGATCCTAT GGAAATCATG
GATTGGATTA ACCTGTTTGC TTTTGCTGTG AGTGAAGAAA ACGCTGCTGG TGGACAAGTG
GTCACGTCGC CAACCAATGG TGCGGCGGGT GTCATTCCTG CGGTGTTGAT GTACTACCAT
CGCTTCATCA AAAAGCTCGA TACCAAACAG CTTAAAGACT TCCTGGCTGT ATCGGGTGCG
ATTGGCATCT TGTACAAAAC CAATGCGTCT ATTTCGGGCG CTGAAGTGGG TTGTCAGGGC
GAAGTCGGTG TATCTTCCTC TATGGCGGCA GCCGGTCTGA CCGCGCTACG TGGTGGCAGC
AATGAGCAAA TTTGTATTGC GGCCGAGATT GCCATGGAGC ACTCACTAGG CATGACCTGT
GACCCAATTG GCGGCTTAGT GCAAGTTCCG TGTATTGAGC GTAATGCCAT GGGAGCTATG
AAAGCGATCA ATGCTTCTCA TATGGCATTA AAGCGAAATA GTAAATGTCT GATCTCGTTG
GATAAGGTGA TTGAAACCAT GTACCAAACG GGCAAAGACA TGAACAAGAA ATACCGCGAA
ACGTCACTGG GTGGATTGGC TTTGATTCAC CTAGCACCGC CTTGCGAATA A
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| Protein sequence | MLSIFDIYKI GVGPSSSHTN GPMIAGYHFT RLIESNLAKV VRIQVDLYGS LSLTGIGHHT
DRATILGLLG NKPDTIKIAS ANKAMRKAIE EGMMSVDGRY EIEFNYKTDM LFHEENLPLH
ENGMTITALD AHGNQVGFET YYSIGGGFIA TADELQNGRA TTPIEVEFPF ASADEMLALA
DKSGMSLGGM ILKNEQSFQD MEAINQRAEQ IWRVMTRCME RGFDTEGILE GGLNVTRRAP
NLLKKLEANA SIENDPMEIM DWINLFAFAV SEENAAGGQV VTSPTNGAAG VIPAVLMYYH
RFIKKLDTKQ LKDFLAVSGA IGILYKTNAS ISGAEVGCQG EVGVSSSMAA AGLTALRGGS
NEQICIAAEI AMEHSLGMTC DPIGGLVQVP CIERNAMGAM KAINASHMAL KRNSKCLISL
DKVIETMYQT GKDMNKKYRE TSLGGLALIH LAPPCE
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