| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_04816 |
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| Symbol | |
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| ID | 5556610 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio harveyi ATCC BAA-1116 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009784 |
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| Strand | + |
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| Start bp | 78626 |
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| End bp | 80167 |
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| Gene Length | 1542 bp |
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| Protein Length | 513 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640909295 |
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| Product | alkaline phosphatase synthesis sensor protein phoR |
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| Protein accession | YP_001446952 |
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| Protein GI | 156976046 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0591] Na+/proline symporter |
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| TIGRFAM ID | [TIGR00813] transporter, SSS family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTACGT ACTCAAGTTT TGTGGTGATT GCTTTATATG TATCAATTAC CATATTAATC
AGCTATTTAG TTAATAAGCG CTACAGTAAT GGTGGCGACT TTTCTACGGG TGGAAAGCAA
TTTGGTTGGT TTACGGCAGG TGTTTCGATA CTTGCGACTT ACATTAGTGC GATGACGTTT
GTAGGGATGC CTGGTTGGGT TTATAGCTCT GGCATGGAAG CGATGAGTAT TCACCTTAAC
TATCCCATCG TTATCTTTTT TACTGTCATC TTCTTTGTAC CTGTCTTTTA TAAGCTAGGT
CTGACTTCGA TTTATGAATA CCTTGAGCAC CGCTTTGGGG TATATGCAAG AACCATCAAC
TCGATAGTGT TTATTGTGGT GCAATGCATT TCAGCGGGTG TGATTCTGTA TGCCGTGGCG
CTGATCTTAG TGCAAGTTCT GCCCATCAGT ATTTCTGAAG CCATCATCTA CATCAGTATT
TTCACCGCTT GCTATACCTA TGCTGGCGGG ATTTCCACGG TGATATGGAC TGATATGTTG
CAATCTGCAG TATTAATTGC GGGCAGCATC GCCATCTTTG CCATTTTAGT GACAGATATA
AATGCGGCCG ATTACCTTTC TCGTGATCAC TTGAATATCA TCAACTTAGA CTTTGATTTA
GGCGTAGATA CCACACTCTG GGCTGGCGTG GTTGCCGTGA GCTTTTTGCA TTTGAGTGTG
TACGGTACCA ACCAATTGAT CATACAACGC ACACTAGCGA CGAGATGTGA AAAGACGGCG
CAGAAATCGA TGCTGTTGTG TGGTTATGGT GCGTTTTTTG TGTACTTATT CTTCGCGGTA
CTTGGTGTCC TCCTGAGTGT TTTCTATCAA GATCAATCGT TTGAAAACAG CAACGAAGTG
ATTTTGGATT TCGTCTTCAA CCACACTAAT CCAATCGTCG TTGGTTTGAT TATTTCCGCA
TTGGCGGCGG CCGCAATGTC GACCTTGGAT TCGACCTACA ACTCAATGGC GACCGTCGCG
ACGTTTGATA TCTACAAGCG TTTCGTTCGC AAAAGTGCCG ATGACGAGCA CTACGAAAAA
GTCGCAAGAA AGATGAGTTT GCTTGCTGCG GCCATGGTGG TAGTGCCAGC TCTTCTGGCG
GTATCGAATG AATCGGTACT CAAAACCATT GCTAGCCTGA CCTCCATCTT TGTGGGTATC
CGTCTTGGTT CGTTCGTGCT TGGCTTATTC TGGGCGAAAG CCAATGAGAA AGGCGTGATC
GTTGGCAGTA TCATGAGTGT GGTTGCGGTG TTTACCGCAA TGTATCTCGA CGTGGCTTGG
CCGTGGTTTG CGCCAATTGG TACGTTCGTC TTCCTTTTAT TTGGTGTGTT AGTGAGTCGT
CGTTGGGGCG CTGTGACTGC CGAACAACAA ATCTTTATCA ACAATCAAAA ACATCTTTTC
GCAAAGCCAA CCGCAAGCCA TTACGGGCTA TTGGTGTTCG CTGTGGCGAC CATCGCCGCT
TGTATGGTTC TCCCTGATTG GCTTTATGCT GCATTGTCGT AA
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| Protein sequence | MVTYSSFVVI ALYVSITILI SYLVNKRYSN GGDFSTGGKQ FGWFTAGVSI LATYISAMTF
VGMPGWVYSS GMEAMSIHLN YPIVIFFTVI FFVPVFYKLG LTSIYEYLEH RFGVYARTIN
SIVFIVVQCI SAGVILYAVA LILVQVLPIS ISEAIIYISI FTACYTYAGG ISTVIWTDML
QSAVLIAGSI AIFAILVTDI NAADYLSRDH LNIINLDFDL GVDTTLWAGV VAVSFLHLSV
YGTNQLIIQR TLATRCEKTA QKSMLLCGYG AFFVYLFFAV LGVLLSVFYQ DQSFENSNEV
ILDFVFNHTN PIVVGLIISA LAAAAMSTLD STYNSMATVA TFDIYKRFVR KSADDEHYEK
VARKMSLLAA AMVVVPALLA VSNESVLKTI ASLTSIFVGI RLGSFVLGLF WAKANEKGVI
VGSIMSVVAV FTAMYLDVAW PWFAPIGTFV FLLFGVLVSR RWGAVTAEQQ IFINNQKHLF
AKPTASHYGL LVFAVATIAA CMVLPDWLYA ALS
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