| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_04815 |
|---|
| Symbol | |
|---|
| ID | 5556609 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio harveyi ATCC BAA-1116 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009784 |
|---|
| Strand | - |
|---|
| Start bp | 77053 |
|---|
| End bp | 78348 |
|---|
| Gene Length | 1296 bp |
|---|
| Protein Length | 431 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640909294 |
|---|
| Product | permease |
|---|
| Protein accession | YP_001446951 |
|---|
| Protein GI | 156976045 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATGCCA AAAGACACAT GAGCGAAGTT CCTATGATTC AAAGGGTAGC TGCCTATCTT
GCGATACTGG TTGGTTACTT TTTCTATTGT TATAACTTTG TAATTATTGA CTACGTACGC
CCATACATCG TTGAAGCGTA TGATAGTATT AGCCTATCAG ACACTGCCCA GTTCTATACC
TGGCAGTCGG TTGGTGCACT CATCGGTGCG TTAAGCTGTG CTTGGTTCGC AACAAAGTTT
GGTAAGAAAT CCACTCTTAT TACCATCACA GCCCTAAACG GTGGCGCAAC GATCATCAAT
ATGATGTTCA CCGACTACAC AACATGGGCA GCAATGCGTT TCATCATTGG TTTGTCACTG
GGTGGTTACT TCACCGTAGC AGTGAGCCTG ATGATCGGTC TATTTACGCC AACGGTACGT
GGCAAGTTGA CGGCGTTCGC GTCTTCTATG TTCTCTGTAG CACTGATGGT CATGGGTGCG
TATGCAGCAT TTATTGCAAG CATCGATGCA CCATGGGAAA GCCTAATGCT TGTTGGTGGT
ATCCCACCAT TGGCAGCCGC TGTGGTCATG ATCTTTGTAC TACCTAGCGA CAGCAAAGTG
ATCGCTTACG GTGAAGAAGA GCAAGCAAAA GCAGAAGAAT CAAGTGCACC AGCGAAAACA
GGCTCTTGGG GCGAAATGCT AAGCAAGCCT TACCGTAAGA TCACATTAAC GTGTCTATTA
CTGGCTGGCC TTAACTTCTA CGGTTTCCAA TTCTTTGGTG GCTTCGTAAC CACTTACCTA
CGTGATGTAC GTATGTTCGA CGGTGCAACC ATCGGTCTCA TCTTCTCTAT CTCAGCATTT
GGTTCACTGT TTGGTGCGTG GTTCTGGGGT TGGGTAGCTG ACAAATTCGG TCGTAAGGTG
AACGCATTTG GCTTCATCCT AGCGGGCATC ATGGTTTCAA TCTTCTTTGT TGCACCTGGC
GACATGGTGA TTGGCGGTCT AAACGTGCTG GCTCTACTTG GTCTGATTTA CAACTTCGGT
CTTTCTTCTT CAGCGGTGTG GGGTGGCTAC TTCTCAGAAC TGTTCCCAGC ACACCTACGT
AGCTATGGCG CAGCGCTATT CCACGGCGGT CGTATCCTTG GTATGTGGGC ACCAATGGTA
CTTATCTTCA TCCAAGAGCG TACCGACCTA CAAACCGCAA TGTGGGGTTC ACCAATCGTA
TGGATCCTTG CTGGTCTTCT ATGGCTATCG CTGCCAGAGA CACTAAAAGG CGGCGTGTTC
GATAAGAGCA AAAAAGCTGA AGCAGCAAAA GCGTAA
|
|---|
| Protein sequence | MNAKRHMSEV PMIQRVAAYL AILVGYFFYC YNFVIIDYVR PYIVEAYDSI SLSDTAQFYT
WQSVGALIGA LSCAWFATKF GKKSTLITIT ALNGGATIIN MMFTDYTTWA AMRFIIGLSL
GGYFTVAVSL MIGLFTPTVR GKLTAFASSM FSVALMVMGA YAAFIASIDA PWESLMLVGG
IPPLAAAVVM IFVLPSDSKV IAYGEEEQAK AEESSAPAKT GSWGEMLSKP YRKITLTCLL
LAGLNFYGFQ FFGGFVTTYL RDVRMFDGAT IGLIFSISAF GSLFGAWFWG WVADKFGRKV
NAFGFILAGI MVSIFFVAPG DMVIGGLNVL ALLGLIYNFG LSSSAVWGGY FSELFPAHLR
SYGAALFHGG RILGMWAPMV LIFIQERTDL QTAMWGSPIV WILAGLLWLS LPETLKGGVF
DKSKKAEAAK A
|
|---|
| |