Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_04807 |
Symbol | |
ID | 5557121 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009784 |
Strand | - |
Start bp | 68189 |
End bp | 69142 |
Gene Length | 954 bp |
Protein Length | 317 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640909286 |
Product | hypothetical protein |
Protein accession | YP_001446943 |
Protein GI | 156976037 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGACC AGCTGACTAT TTCTATCTCG ACCATCAATG GCTCTAAGCA TTGGTACTTC AGCAAAGCCA TGCAGCGTAA CTTTAAAACG TGCTTGGCGG TATTCGCCTT GGGGTTAGCA GCGACAGCGA TGTTGGTGAA TCACCTCTAC TCTCAAGTGG ATGAGGCGGT GCTTGAACAA GCAAAGTTAT CCGAGCATTC ACGCAATATG GGGCAAGAGT TAAGTCAGCT AAAAACACTG AAGTCAGAGC TTGAGAACGA CCTCTCTGAA CGAGAAGAGC GCGTCCAACT TGTTTCTGAA CGTTTGGGCG AGTTGGAGAA AGTACTCGGT GTCGCCAACG AATCCAACAC TGAAAGTCTA GATGCGCGCT TTGATACCGC CGCGATCACG TCCAATGTCA GAATGGTGAT GCTAAACCAG ATCCCCAGCG GCTCTCCAGT CGGTAAAGCA CGCCTTTCAT CGGGGTTTGG CAAGCGTATT CACCCTGTCA CCAAGCAGGC CAAGCTGCAC CGAGGACTCG ACTTTGCAGT TAACACTGGC ACCAAAGTAT ATGCCTCCGC CGACGGCGTT GTAGAAGCGG CCCGTCGAAG TTACAAAGGT TACGGTAACT TGTTGCGTTT ACAGCATTCA TTTGGTTTTT CGAGCGCTTA CGCACACTTA AAAGAGTTCA AGGTTAAAGC GGGTGAGTTT GTTAAAAAAG GACAGCTCAT CGCCATTTCA GGCAATACCG GGCTCTCTTC CGGTCCTCAC CTTCATTACG AGGTGAGATT TATTGGACGA GCCTTAGATC CGAGGCCATT CGTGGATTGG CACCTCAATG ATTTTGAAGA CATTTTTACC AAGGAGCGAA GAATACGATG GGAATCTTTA ATCAAAACCG TGGAACAACG AGTGGCTCAT CAGCTTCAAC TCTCATCGCC AAAGGCTGTT CTGTTAGCGG AGAACTCAAA GTAG
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Protein sequence | MKDQLTISIS TINGSKHWYF SKAMQRNFKT CLAVFALGLA ATAMLVNHLY SQVDEAVLEQ AKLSEHSRNM GQELSQLKTL KSELENDLSE REERVQLVSE RLGELEKVLG VANESNTESL DARFDTAAIT SNVRMVMLNQ IPSGSPVGKA RLSSGFGKRI HPVTKQAKLH RGLDFAVNTG TKVYASADGV VEAARRSYKG YGNLLRLQHS FGFSSAYAHL KEFKVKAGEF VKKGQLIAIS GNTGLSSGPH LHYEVRFIGR ALDPRPFVDW HLNDFEDIFT KERRIRWESL IKTVEQRVAH QLQLSSPKAV LLAENSK
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