Gene VIBHAR_04752 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_04752 
Symbol 
ID5557766 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand+ 
Start bp21740 
End bp22387 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content49% 
IMG OID640909231 
Productputative aldolase 
Protein accessionYP_001446888 
Protein GI156975982 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases 
TIGRFAM ID[TIGR00760] L-ribulose-5-phosphate 4-epimerase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAAAG ACTTAATGAC AGAGCAGCAA CTGCGAGATC AAATGGTGAC CCTGGCTCGC 
TCTATGTTTG AGCGCGGCTA CGCAACGGGC GGTGCTGGTA ACTTGTCTGT GAAATTACCG 
AATGGCCATT TTTTGGCAAC GCCGACGGGT TCCTCGTTTG GGCGTTTAGT GGCAGAAGAA 
CTGTCTGTCG TGGATATCGA TGGCAACCAT ATCTCGGGTA AAAAGCCGTC GAAAGAAGTG 
GCATTTCACC TAGCCATTTA CCGCAATAAT TCGCAATGCA ATGCCATCGT GCATTTGCAT 
TCAACGTACC TAACGGCGTT GTCTTGCCTT GAAGAGTTAG ACCGCGCCAA TGCCATCAAA 
GCATTCACAC CTTACTTTGT GATGCGCATT GGTGAGCTAC CAGTGATCCC TTACCTGCGT 
CCGGGGGATC CACAAATCGC AGAAGAACTC GCACAACGTG CTGGTGACTA TCGTGCCTTC 
TTACTGGCTA ACCACGGCCC GGTCATTACA GGCACAGACT TTGAAGATGC AGTAGACAAC 
GCTGAAGAGC TGGAAGAAAC CGCAAAACTG GCGTTCATTC TTAAAGACAG CAACATCCGC 
TACCTAACGG ATGCCGAGGT TCAAGACCTA AAAGGGAGAG GTAAATAA
 
Protein sequence
MNKDLMTEQQ LRDQMVTLAR SMFERGYATG GAGNLSVKLP NGHFLATPTG SSFGRLVAEE 
LSVVDIDGNH ISGKKPSKEV AFHLAIYRNN SQCNAIVHLH STYLTALSCL EELDRANAIK 
AFTPYFVMRI GELPVIPYLR PGDPQIAEEL AQRAGDYRAF LLANHGPVIT GTDFEDAVDN 
AEELEETAKL AFILKDSNIR YLTDAEVQDL KGRGK