Gene VIBHAR_03692 details

Gene Information

• Locus tag: VIBHAR_03692
• ID: 5556090
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio harveyi ATCC BAA-1116
• Kingdom: Bacteria
• Replicon accession: NC_009783
• Strand: -
• Start bp: 3728307
• End bp: 3728762
• Gene Length: 456 bp
• Protein Length: 151 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 640909171
• Product: hypothetical protein
• Protein accession: YP_001446833
• Protein GI: 156975926
• COG category: [N] Cell motility; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG2165] Type II secretory pathway, pseudopilin PulG
• TIGRFAM ID: [TIGR02532] prepilin-type N-terminal cleavage/methylation domain

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAGAC AAGGTGGTTT CACCCTTATC GAATTGGTAG TGGTAATTGT AATCCTAGGT 
ATTCTAGCGG TAACTGCAGC ACCACGTTTC CTTAACCTGC AAAATGATGC TCGAGCTTCA 
TCTTTACAAG GTCTAAAAGG TGCTATTGAA GGTGGTGCTG GTATTGTGTT TGGTAAAGCG 
GCTATTGAAG GTGTAGAGGC TAGCAGCACG GCTACAGATG TTGAAGGTAT CCAAACAATT 
TTTGGTTACC CAACGGCAAC AGCTGCGGGT ATTGGTGAAG CAGTAAAAGG TCTTAATGAA 
GACTGGGATG TTGTTGCAAG TGGCGCTGGT GAAATTACGT ATGGTTTCAA AGGTACTACT 
GGTACTGCTT GTTCAGTTAA ATATGAGCAA GCGACTGGCA CGGCAACAGC TAGCGCAGCT 
AAAACAACAG TAACTTTAGG TTCTGCTTGT GAGTAA 

 

Protein sequence

MKRQGGFTLI ELVVVIVILG ILAVTAAPRF LNLQNDARAS SLQGLKGAIE GGAGIVFGKA 
AIEGVEASST ATDVEGIQTI FGYPTATAAG IGEAVKGLNE DWDVVASGAG EITYGFKGTT 
GTACSVKYEQ ATGTATASAA KTTVTLGSAC E