| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_03674 |
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| Symbol | |
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| ID | 5555107 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio harveyi ATCC BAA-1116 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009783 |
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| Strand | - |
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| Start bp | 3702728 |
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| End bp | 3703480 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640909153 |
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| Product | ribosomal large subunit pseudouridine synthase A |
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| Protein accession | YP_001446815 |
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| Protein GI | 156975908 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAATGC TTGAGTACAA TCCACCAACC GATCCTTGGA TTGATGTCGT TTTTGAAGAT
GAGCAAATTT TGGCGGTAAA CAAGCCATCG GGTTTGCTCT CTGTGCCGGG GCGTCTCGCT
GAGCACTATG ACAGTATGTG GAGTCGACTC ACTGAGCAGT ATCCAGATAT TCAAGTCGTG
CATCGCTTAG ATATGTGCAC TTCCGGTTTG ATGGTACTGG CGAAGAACAA ACGTGCAGAA
AGCGCGTTAA AGAAACAGTT TCAATACCGA TTGACGCATA AGATTTACTA TGCGCGCGTT
TGGGGTCATA TAGAGCAAGA AGAGGGTGAG ATTGACCTGC CGCTGATTTG TGATTGGCCT
AATCGTCCGT TGCAGAAAGT GTGTTTTGAA GATGGCAAAC CTTCTAAGAC GCTTTTCCAA
GTAGCGAAGC GAGAAAAGCA TTCTGATGGT TCAAAGACGA CGATTGTACG TTTGTTGCCG
ATCACTGGTC GCTCACACCA ATTGCGTGTC CACATGCAAG CATTAGGTCA CCCGATTGTG
GGCGATGAAT TTTACGCAAC TGAAGAAGCG AAAGCCTTCT CCGAGCGCCT AGAACTGCAT
GCCGCTGAGT TGAGCTTTTA CCATCCGATA TGCCATTCGC TGCGCAGCAT TTTTGTTCCT
TGTGATTTTT ACCCGGAAGC GGAAGCGATG ATCTTTGACT ATTTCGACCC AGAGCGTAAA
TTACCAGATT ACAAAACACT GCCACGTCCA TAA
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| Protein sequence | MAMLEYNPPT DPWIDVVFED EQILAVNKPS GLLSVPGRLA EHYDSMWSRL TEQYPDIQVV
HRLDMCTSGL MVLAKNKRAE SALKKQFQYR LTHKIYYARV WGHIEQEEGE IDLPLICDWP
NRPLQKVCFE DGKPSKTLFQ VAKREKHSDG SKTTIVRLLP ITGRSHQLRV HMQALGHPIV
GDEFYATEEA KAFSERLELH AAELSFYHPI CHSLRSIFVP CDFYPEAEAM IFDYFDPERK
LPDYKTLPRP
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