Gene VIBHAR_03662 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_03662 
Symbol 
ID5554914 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand+ 
Start bp3691530 
End bp3692024 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content46% 
IMG OID640909141 
Producthypothetical protein 
Protein accessionYP_001446803 
Protein GI156975896 
COG category[S] Function unknown 
COG ID[COG1934] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03002] lipopolysaccharide transport periplasmic protein LptA 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACCGT TACACCTTAG CCTATTGGCA TTGGTTTTAG CAGCGCCGCA AGCGTTAGCC 
CTTAAGTCGG ATACTCAGCA GCCGGTTTAC ATCAATTCAG ACACCCAACA GGTTGATATG 
CAGAGCAACC AGGTCACCTT CAAAGGTAAT GTCTCCCTGA AGCAAGGCAG CATCAATATC 
GATGCTGATA GAGTTGTTGT GACTCGCGAT CCTAAAACCG AGTCGATTAA ACAGATCCAA 
GCATTTGGCA AGCCTGCTAC GTTTTCTCAG TTGATGGACG ATGGTAAAAC GCTAAGCGGC 
CAAGCAAACG AACTAGACTA CCGCATCTCT ACTGATGAAT TGACCATGAA GGGCCAAGCT 
CAGTTGAAGC AGGATGGCAA TACTATCCAA AGCTCTTCTA TACGTTACCA AATTGGCCAA 
CAGAAGTTGG TAGCTGACAG CTCAGACAAT GAGCGCGTAA CCACCATTCT GCAACCGAAT 
CAAATCGAGA ACTAA
 
Protein sequence
MKPLHLSLLA LVLAAPQALA LKSDTQQPVY INSDTQQVDM QSNQVTFKGN VSLKQGSINI 
DADRVVVTRD PKTESIKQIQ AFGKPATFSQ LMDDGKTLSG QANELDYRIS TDELTMKGQA 
QLKQDGNTIQ SSSIRYQIGQ QKLVADSSDN ERVTTILQPN QIEN