Gene VIBHAR_03660 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_03660 
Symbol 
ID5555024 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand+ 
Start bp3689924 
End bp3690895 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content47% 
IMG OID640909139 
Producthypothetical protein 
Protein accessionYP_001446801 
Protein GI156975894 
COG category[M] Cell wall/membrane/envelope biogenesis
[T] Signal transduction mechanisms 
COG ID[COG0794] Predicted sugar phosphate isomerase involved in capsule formation
[COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains 
TIGRFAM ID[TIGR00393] KpsF/GutQ family protein 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCACTC AATTTGATTT TCGCGCTGCA GCTAAACAAG TTCTTGATAT TGAGGTCTCA 
GCTTTACAAC AGCTAGACCA ATACTTTGAT GCTCAGTTTG AGCAAGCGTG CGAATTGATT 
CTTTCCAACA ACGGCAAAGT TGTCGTGATG GGCATGGGCA AATCAGGCCA TATTGGCAAC 
AAGATTGCCG CAACGCTTGC CAGCACAGGT ACCTCTGCGT TTTTTGTTCA CCCAGGTGAA 
GCAGCACATG GTGACCTTGG TATGATCAGT GCGGGTGACA TCGTTATCGC GATTTCAAAC 
TCGGGTGAGT CTCATGAGAT TCTGTCTCTA TTCCCAGTTT TGAAACGCCT TAGCATCAAA 
ATCATCAGCA TGACTGGCAA GCCAGAGTCG AACATGGCGA AGTTGTCTGA TCTGCATTTG 
CAAATCACTG TGCCAAAAGA AGCTTGCCCA CTTGGTCTCG CGCCAACCAG CAGTACAACG 
GCGACTTTGG TTATGGGTGA TGCTCTGGCT GTTGCGCTTC TGCAAGCTCG TGGCTTCTCA 
GCGGAAGACT TTGCATTATC ACACCCTGGT GGTGCGCTGG GAAGAAAATT GCTGCTTAAG 
CTGTCTGATA TAATGCACTT CGGTAATGCA CTACCAAAAG TATCACCTGA TGCGCTTATT 
CGTGACGCCT TGCTCGAGAT TTCTGAAAAA GGCTTGGGCA TGACAGCCAT CGTCGATGAG 
CACGATGCTA TGCTTGGTAT ATTCACCGAT GGCGATTTAC GTCGTACTTT GGATAAGCGC 
ATTGATATCC ACACCACAGC AATTGGTGAA GTGATGACGC AAAACCCAAC TACAGCACAT 
CCGGAGATGT TAGCGGTAGA GGGGGTGAAT CTAATGCAAG ACAAGAACAT CAATGCTCTG 
ATCTTGTGCG ATAACAATAA GATTGTTGGC GCACTGAATA TGCATGATTT ATTGAAAGCT 
GGCGTGATGT AG
 
Protein sequence
MSTQFDFRAA AKQVLDIEVS ALQQLDQYFD AQFEQACELI LSNNGKVVVM GMGKSGHIGN 
KIAATLASTG TSAFFVHPGE AAHGDLGMIS AGDIVIAISN SGESHEILSL FPVLKRLSIK 
IISMTGKPES NMAKLSDLHL QITVPKEACP LGLAPTSSTT ATLVMGDALA VALLQARGFS 
AEDFALSHPG GALGRKLLLK LSDIMHFGNA LPKVSPDALI RDALLEISEK GLGMTAIVDE 
HDAMLGIFTD GDLRRTLDKR IDIHTTAIGE VMTQNPTTAH PEMLAVEGVN LMQDKNINAL 
ILCDNNKIVG ALNMHDLLKA GVM