Gene VIBHAR_03580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_03580 
Symbol 
ID5554138 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand+ 
Start bp3628435 
End bp3628983 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content49% 
IMG OID640909060 
Producthypothetical protein 
Protein accessionYP_001446742 
Protein GI156975835 
COG category[S] Function unknown 
COG ID[COG0762] Predicted integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTTTTC TCATCTCAAC CCTATTTGAC CTGTACATCA TGGTCGTCAT TTTGCGTATA 
TGGTTGCAAG CTGCTCGTGC AGATTTCTAC AACCCATTCT CGCAGTTCAT CGTCAAAGCA 
ACCCAACCGG TTGTGGGTCC ACTGCGCCGC GTGATCCCAT CCATCGGCAG CATCGACCTA 
GCGACGGTAT TGTTCGCTTA CGTACTGTGT GTGCTTAAGT TTGTTGCGCT GATCCTGATC 
GCTTCTAGCG GGTCAGTTTC ATTCAGTATG GACTTCCTAT TCCTAGGCTT ATTGTCTTTA 
ATTAAAGCCG CTGGCGGCTT GCTGTTCTGG GTACTATTGA TCCGCGCAAT CCTGAGCTGG 
GTTAGCCAAG GTCGCAGCCC TATCGAATAC GTATTCCACC AGCTAACTGA GCCAATGCTA 
GCGCCAATCC GTCGCATCAT CCCTGCAATG GGTGGCTTCG ATTTAAGCGT ACTAGTGCTG 
TTTATCGGCC TACAATTCGC TAACTTCCTA ATGGGCGACA TGATTGGTCC TATCTGGTAT 
CAACTATAA
 
Protein sequence
MSFLISTLFD LYIMVVILRI WLQAARADFY NPFSQFIVKA TQPVVGPLRR VIPSIGSIDL 
ATVLFAYVLC VLKFVALILI ASSGSVSFSM DFLFLGLLSL IKAAGGLLFW VLLIRAILSW 
VSQGRSPIEY VFHQLTEPML APIRRIIPAM GGFDLSVLVL FIGLQFANFL MGDMIGPIWY 
QL