| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_03577 |
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| Symbol | |
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| ID | 5554276 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio harveyi ATCC BAA-1116 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009783 |
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| Strand | - |
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| Start bp | 3625644 |
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| End bp | 3626684 |
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| Gene Length | 1041 bp |
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| Protein Length | 346 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640909057 |
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| Product | hypothetical protein |
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| Protein accession | YP_001446739 |
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| Protein GI | 156975832 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2805] Tfp pilus assembly protein, pilus retraction ATPase PilT |
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| TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATATCA CTGAGTTACT GGATTTTAGT GTAAAACATA ATGCTTCGGA TCTACATCTT
TCTGCAGGTG TACCACCAAT GGTTCGTATT GATGGTGATG TAAGAAAACT GGGCATTCCA
GCGTTTACAC ACCAAGAAGT GCACCGTTTG GTTTTTGAAA TCATGAACGA TGCGCAGCGC
AGTGAGTTCG AAGAAAAACT CGAAGTCGAC TTTTCATTTG AATTGCATAA CGTTGGCCGT
TTTCGTGTCA ACGCTTTCAA CCAATCTCGC GGTTGTGCGG CGGTGTTCCG TACCATCCCA
AGTAGCATTC CAACACTGGA AGAGCTAGAA GCTCCTGAGA TCTTCAGAAA AATCGCCAAT
TCGGAAAAAG GTTTGGTACT GGTTACTGGC CCAACGGGTT CTGGTAAATC GACTACCTTG
GCTGCCATTG TTGACTACAT TAACCGTAAT CACAATAAGC ACGTCCTAAC AATTGAAGAT
CCGATTGAAT TTGTTCACAC CAACAATAAG TGTCTGATCA ACCAACGTGA AGTACACCGT
GATACACACA GCTTCCAAAA CGCGCTACGC AGCGCGCTGC GTGAAGACCC GGATGTGATC
CTAGTTGGTG AGATGCGTGA TAAAGAAACT ATCAGTTTGG CGCTGACGGC TGCTGAAACG
GGTCACCTTG TTTTCGGTAC GTTGCACACT AGCTCGGCAG CGAAAACCAT CGACCGTATT
ATTGACGTCT TCCCTGGTAG CGACAAAGAC ATGGTGCGTT CGATGCTGTC TGAATCATTG
CGTTCGGTTA TCGCGCAAAA ACTTCTGAAA CGTAACGGCG GCGGTCGAAT CGCGTGTCAC
GAAATCATGA TGGCTACGCC TGCGATCCGT AACCTTATCC GTGAAGACAA AGTCGCGCAG
ATGTATTCGA TCATTCAGAC TGGTGCGGCG CATGGTATGC AGACCATGGA GCAGAATGCT
CGTCAATTGA TGGCGCAAGG CATGGTATCG CGTGAAGAAG TGGATAAGAA AGTTGAAATT
GAAGCGCAGC AATTCTCGTA A
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| Protein sequence | MDITELLDFS VKHNASDLHL SAGVPPMVRI DGDVRKLGIP AFTHQEVHRL VFEIMNDAQR
SEFEEKLEVD FSFELHNVGR FRVNAFNQSR GCAAVFRTIP SSIPTLEELE APEIFRKIAN
SEKGLVLVTG PTGSGKSTTL AAIVDYINRN HNKHVLTIED PIEFVHTNNK CLINQREVHR
DTHSFQNALR SALREDPDVI LVGEMRDKET ISLALTAAET GHLVFGTLHT SSAAKTIDRI
IDVFPGSDKD MVRSMLSESL RSVIAQKLLK RNGGGRIACH EIMMATPAIR NLIREDKVAQ
MYSIIQTGAA HGMQTMEQNA RQLMAQGMVS REEVDKKVEI EAQQFS
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