Gene VIBHAR_03576 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_03576 
Symbol 
ID5553460 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand- 
Start bp3624506 
End bp3625612 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content48% 
IMG OID640909056 
Producthypothetical protein 
Protein accessionYP_001446738 
Protein GI156975831 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG5008] Tfp pilus assembly protein, ATPase PilU 
TIGRFAM ID[TIGR01420] pilus retraction protein PilT 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATCTGA ATAAATTTCT CGAAGGCATG TTGGCGTTAA AAGCGTCGGA TCTCTACATC 
ACTGTCGGTG CTCCGATTTT GTTTCGTGTG GATGGCGAAT TGCGCCCGCA AGGCGATAAG 
CTGACTGAAA ATGATGTCGC CTTGTTACTC GACAGTGCCA TGGAACCAGA GCGACGCCAG 
GAGTTTCGTA AAAGCCGTGA GTCTAACTTT GCCATTGTCC GTGATTGCGG TCGTTTCCGT 
GTCAGTGCCT TTTTCCAACG TGAATTACCG GGAGCCGTTA TTCGTCGTAT TGAAACCAAT 
ATTCCGACGT TTGAGCAACT TAAGTTACCT TTGGTACTGC AAGACCTTGC TATTGCCAAG 
CGTGGCTTAG TGCTGGTGGT TGGTGCCACT GGTTCTGGTA AGTCGACCAC TATGGCGGCG 
ATGACGGGTT ATCGCAACAA CAACAAAACG GGTCATATAC TGACGGTAGA AGACCCGATT 
GAATTTGTGC ACGAACATAA GCGTTGCATC GTGACACAGC GTGAAGTTGG CTTAGACACC 
GACAGCTATG AAGTGGCGTT GAAAAACTCG TTACGTCAGG CGCCAGACAT GATTTTGATT 
GGTGAGATCC GTAGCCGAGA AACGATGGAA TACGCGATGA CCTTTGCTGA GACTGGTCAC 
TTGTGTATGG CGACACTGCA CGCCAACAAC GCAAACCAAG CGCTGGAGCG TATTTTGCAC 
CTAGTGCCAA AAGATCAGAA AGATCAGTTC CTGTTTGATC TGTCGATGAA CTTAAAAGGT 
GTAGTAGGTC AGCAGTTGAT CCGTGATAAG AACGGTCAGG GGCGTCATGG CGTGTTTGAG 
ATCTTATTAA ACAGTCCGCG TGTTTCTGAT CTGATCCGTC GCGGTGATCT GCATGAATTG 
AAATCGACCA TGGCTCGCTC TAACGAGTTC GGGATGTTGA CCTTCGACCA ATCGCTCTAC 
AAGTTGGTGA TGCAAGGTAA GATTAGCGAA GAGGATGCAT TGCACAGTGC AGATTCAGCC 
AACGATCTGC GTTTGATGTT GAAGACGCAA CGTGGTGAAG CCTTCTCTAC AGGCACGCTG 
GCGAATGTTA AGATCGATAT GGATTAA
 
Protein sequence
MDLNKFLEGM LALKASDLYI TVGAPILFRV DGELRPQGDK LTENDVALLL DSAMEPERRQ 
EFRKSRESNF AIVRDCGRFR VSAFFQRELP GAVIRRIETN IPTFEQLKLP LVLQDLAIAK 
RGLVLVVGAT GSGKSTTMAA MTGYRNNNKT GHILTVEDPI EFVHEHKRCI VTQREVGLDT 
DSYEVALKNS LRQAPDMILI GEIRSRETME YAMTFAETGH LCMATLHANN ANQALERILH 
LVPKDQKDQF LFDLSMNLKG VVGQQLIRDK NGQGRHGVFE ILLNSPRVSD LIRRGDLHEL 
KSTMARSNEF GMLTFDQSLY KLVMQGKISE EDALHSADSA NDLRLMLKTQ RGEAFSTGTL 
ANVKIDMD