Gene VIBHAR_03566 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_03566 
Symbol 
ID5554116 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand- 
Start bp3613889 
End bp3614926 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content45% 
IMG OID640909046 
Producterythrose 4-phosphate dehydrogenase 
Protein accessionYP_001446728 
Protein GI156975821 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase 
TIGRFAM ID[TIGR01532] D-erythrose-4-phosphate dehydrogenase
[TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTAAAAG TTGCGATCAA TGGATTTGGA CGTATCGGTC GTAATGTACT GCGTGCAGTA 
TATGAGAGCG GTAAGCATCA GCAGATAAAA GTTGTGGCGG TTAATGAACT CGCGCAACCC 
GAAGCGATGG CACATCTTCT TCAATATGAC ACCAGTCATG GCCGCTTCGG AAAGAAAATC 
TCGCACGACC AAGAGCACCT CTACGTTCAC CACGACAGTA GTGAATACGA TCCCATTAGA 
ATCCTTCACC TTGCTGAAAT TGAACTCTTG CCATGGCGTG ACTTAGAAGT CGACATCGTG 
CTCGATTGCA CTGGTGTTTT TGGCTCACAA GCAGACGGCC AAGCTCATAT TGAAGCTGGC 
GCGCAAAAAG TTCTGTTTTC ACATCCTGGC GCAAGCGATC TCGATAACAC CATTATCTAC 
GGTGTGAACC ACGAAACCCT CAAAGATGAA CACCGCGTGG TGTCCAACGG TTCATGTACC 
ACCAACTGTA TCGTTCCTAT CATCAAAGTA TTAGATGAGG CCTTTGGCAT TGAGTCTGGC 
ACTATCACCA CGATTCACTC TTCAATGAAC GATCAGCAAG TTATCGACGC TTACCACAAT 
GATTTACGTC GTACGCGTGC AGCCAGTCAA TCCATCATTC CTGTCGATAC TAAGTTGCAT 
AAGGGTATTG AAAGAATCTT CCCGAAATTT TCCAACAAAT TCGAAGCAAT TTCGGTTCGA 
GTTCCGACAG TTAACGTCAC TGCGATGGAT TTAAGTGTCA CAATTAGTAC AAATGTGAAA 
GTTAATGACG TAAATCAAAC CATTGTTAAC GCATCTCAGT GTACATTACG TGACATTGTT 
GACTATACTG AATCGCCGCT CGTTTCCATC GACTTTAACC ACGATCCCCA TAGTGCAATT 
GTGGATGGAA CTCAGACAAG AGTGAGTAAC GGGCAACTCG TTAAAATGCT CGTTTGGTGC 
GATAACGAAT GGGGCTTTGC TAACCGGATG CTGGATACCG CCTTAGCAAT GCAAGCTTCT 
TCACAAGTGG AGCAATAA
 
Protein sequence
MLKVAINGFG RIGRNVLRAV YESGKHQQIK VVAVNELAQP EAMAHLLQYD TSHGRFGKKI 
SHDQEHLYVH HDSSEYDPIR ILHLAEIELL PWRDLEVDIV LDCTGVFGSQ ADGQAHIEAG 
AQKVLFSHPG ASDLDNTIIY GVNHETLKDE HRVVSNGSCT TNCIVPIIKV LDEAFGIESG 
TITTIHSSMN DQQVIDAYHN DLRRTRAASQ SIIPVDTKLH KGIERIFPKF SNKFEAISVR 
VPTVNVTAMD LSVTISTNVK VNDVNQTIVN ASQCTLRDIV DYTESPLVSI DFNHDPHSAI 
VDGTQTRVSN GQLVKMLVWC DNEWGFANRM LDTALAMQAS SQVEQ