| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_03562 |
|---|
| Symbol | |
|---|
| ID | 5554049 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio harveyi ATCC BAA-1116 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009783 |
|---|
| Strand | - |
|---|
| Start bp | 3610022 |
|---|
| End bp | 3610888 |
|---|
| Gene Length | 867 bp |
|---|
| Protein Length | 288 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 640909042 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001446724 |
|---|
| Protein GI | 156975817 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0668] Small-conductance mechanosensitive channel |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGGTG AATCGATGGG TATCGATACC TCTTTAACGG ATGGTTTGAG CAAAGCTGAA
ACATGGCTAA ATAACAACTC AGATCTTCTT ATTCAGTACG GTGTAAACAT CATCTCTGCA
CTGCTGATCC TATTTATCGG TAACATTATC GTTAAAGCGG TAGCAAACAG CGTTTCAAAA
GTGCTTGAAA AGAAAAAGAT GGACAAAGCG GTTGTTGAAT TCGTCAACGG TCTAGTTCGT
TACCTTCTAT TTGTTATCGT ACTTATCGCG GCACTAGGTC GTGTAGGTGT TCAAACTGCA
TCTGTAGTTG CGGTAATCGG TGCGGCAGGT CTTGCTGTTG GTCTTGCTCT ACAAGGCTCA
CTATCTAACT TCGCTGCGGG TGTATTGATT GTTGCATTCC GTCCATTCAA GTCTGGTGAC
TACGTAGAAA TCGGCGGTGT GGCAGGTAGC GTTGAAGCAA TTCAAATCTT CCAAACAGTA
CTAAAAACAC CAGACAACAA AATGGTTGTT GTACCTAACT CGTCAGTTAT TGGCGGCGCA
ATCACTAACT ACTCTCGCCA CGCGACGCGT CGTGTAGATC TAGTGATTGG TGTTTCTTAC
AAAGCGGATC TTAAGCAAAC TAAACAAGTG ATTCGTGAAA CGCTAGAAAA AGACCCTCGT
ATACTGAAAG ATCCAGACAT GACGATTGGT GTGTTAGCAC TAGCAGATTC TTCAGTTAAC
TTCGTAGTTC GTCCATGGTG TAAAACAGCT GATTACTGGG ACGTTTACTT CGATTCTACT
CTAGCAATCA AAGAAGCGTT GGATGCAGCT GGTATCGAAA TTCCATTCCC ACAAATGGAC
GTTCACTTGA ACAAAGTAGA AGCTTAA
|
|---|
| Protein sequence | MAGESMGIDT SLTDGLSKAE TWLNNNSDLL IQYGVNIISA LLILFIGNII VKAVANSVSK
VLEKKKMDKA VVEFVNGLVR YLLFVIVLIA ALGRVGVQTA SVVAVIGAAG LAVGLALQGS
LSNFAAGVLI VAFRPFKSGD YVEIGGVAGS VEAIQIFQTV LKTPDNKMVV VPNSSVIGGA
ITNYSRHATR RVDLVIGVSY KADLKQTKQV IRETLEKDPR ILKDPDMTIG VLALADSSVN
FVVRPWCKTA DYWDVYFDST LAIKEALDAA GIEIPFPQMD VHLNKVEA
|
|---|
| |