Gene VIBHAR_03557 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_03557 
Symbol 
ID5554166 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand- 
Start bp3606819 
End bp3607514 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content46% 
IMG OID640909037 
Producthypothetical protein 
Protein accessionYP_001446719 
Protein GI156975812 
COG category[S] Function unknown 
COG ID[COG2968] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACTGT CTTCATGTTT ATTGGCCTCA GCACTCAGCC TTACCAGCAT TTCTGTTTTT 
GCGAATGATG TGCCGAATTT TGCCCATGTA TCAACCACGG GTTACGGTGA AGTGGTTGCA 
ACACCAGATA TGGCAACCTT CTCTGTAAAG GTTGTTGATA CGACAATGAC AGCTGAGCAG 
GCGAAACAAT CGGTCGATAA TACGGTTGAT GAGTTTCTGA AGAGCCTAGC CGATGCTGGT 
TTATCGAAAG ACAATATTAC CAGCTCAAAC TTGTACTTAG CGCCTCAGTA CCACTACCCG 
AAATCTGGGA AAGCGGAACT GGTTGGTTAC CGAGCGTCAC GCAGCATTGA TGTAACCGTC 
AGTGATTTAG CGAATTTGAA TGAATACTTG GACATGGCGC TTAAGGCGGG CATCAACCAA 
GTCGACAACA TTCAGCTTAA AGTGAGTAAC CAATCTGAGT ACCAGCAAAA GGCACGTATG 
GCAGCGATTA AAGACGCGCA AAGCAAAGCG GCCTCTTTAG CGACGGGGTT TGATAAGAAG 
CTAGGTGATG TGTGGCAGAT CAATTATAAC CAAATGCACG CTCGCCCTGT ACTGATGCGC 
TCGATGGCAA TGGATGCGAG AGAGAGCTCT AACAGCTACC AAGACTCTAC ACTCGTGATT 
CGTGACCAAG TTGATGTGGT TTACAAGCTT AAATAA
 
Protein sequence
MKLSSCLLAS ALSLTSISVF ANDVPNFAHV STTGYGEVVA TPDMATFSVK VVDTTMTAEQ 
AKQSVDNTVD EFLKSLADAG LSKDNITSSN LYLAPQYHYP KSGKAELVGY RASRSIDVTV 
SDLANLNEYL DMALKAGINQ VDNIQLKVSN QSEYQQKARM AAIKDAQSKA ASLATGFDKK 
LGDVWQINYN QMHARPVLMR SMAMDARESS NSYQDSTLVI RDQVDVVYKL K