Gene VIBHAR_03554 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_03554 
Symbol 
ID5553800 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand+ 
Start bp3603946 
End bp3604539 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content47% 
IMG OID640909034 
Producthypothetical protein 
Protein accessionYP_001446716 
Protein GI156975809 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0212] 5-formyltetrahydrofolate cyclo-ligase 
TIGRFAM ID[TIGR02727] 5,10-methenyltetrahydrofolate synthetase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGACC TATCTCGACA AGAATTCCGC AAACTTATCC GTGAAAAACG TAATGCGCTT 
TGTAGTGACA CTCAGTTTCA AGCAGGGCTC GATCTGATTC ACCAATTTTC ACAATTACCG 
GAAATCAAAA CCGCACAACA CATTGCCATC TACCTCTCCG CCGATGGCGA GTTAGACACC 
AAACCTCTAA TAGAGTCACT ATGGCAGCAA GGTAAGTCGA TTTACCTGCC CGTCATCCAC 
CCTTTCTCGA AAGGTCAGTT ACTCTTTTTG CAGTATCTCA ATGATGATCA GTTGGTGTAC 
AACAAATACG GAATCTTAGA ACCTGCGCTG GATATTCGTC ACCTCAAACC AGTGCGTGAG 
CTGGATGTCA TTTGTACGCC TTTAGTCGGG TTTGACAGTG TCGGCCATCG CTTAGGTATG 
GGCGGAGGCT ACTACGACCG TACGCTCTCA CGCTGGTTTA GTACTGGCGA AGGCGCCAAA 
CCTATCGGTA TTGCCCACGA TTGTCAGCAC GTTGAACGTC TACCTATTGA AAATTGGGAT 
ATTCCATTGC CTAAGATCGT GACTCCAAGC CAAATCTGGC AATGGGAAAA GTAA
 
Protein sequence
MSDLSRQEFR KLIREKRNAL CSDTQFQAGL DLIHQFSQLP EIKTAQHIAI YLSADGELDT 
KPLIESLWQQ GKSIYLPVIH PFSKGQLLFL QYLNDDQLVY NKYGILEPAL DIRHLKPVRE 
LDVICTPLVG FDSVGHRLGM GGGYYDRTLS RWFSTGEGAK PIGIAHDCQH VERLPIENWD 
IPLPKIVTPS QIWQWEK