Gene VIBHAR_03546 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_03546 
Symbol 
ID5555125 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand+ 
Start bp3597781 
End bp3598749 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content49% 
IMG OID640909026 
Productaminomethyltransferase 
Protein accessionYP_001446709 
Protein GI156975802 
COG category[R] General function prediction only 
COG ID[COG0354] Predicted aminomethyltransferase related to GcvT 
TIGRFAM ID[TIGR03317] folate-binding protein YgfZ 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAATGGC AAACTCGCTT TTCACCACTG AACCTATCGA CACAAGACGC ACTACCTGAG 
CTGTCTATCT CGCTATTGGA TAACCTGGGC ATGATCACCA TGGTCGGGGA TGACAAAAAG 
TCATACCTAC ACGGTCAAGT TACTTGTGAT GTGGTTTCTC TTGAGAAAGA CCAATCAATG 
TTGGGTGCCC ATTGTGATGC GAAAGGTAAA GTGTGGAGCG TCTTCCGCCT ATTCCACCAT 
AACGATGGCT ACGCAATGGT TCAGCCGAAA TCAGCGATTG AAGTGGAACT GAAAGAAATC 
AAAAAGTACG CGGTGTTCTC TAAAGTGACC ATCGAAGAGT CTAGCGACAT TGTGCTAGGT 
GTCGCTGGTG AGAATGCCGA TGCGTTCATC TCAACATTAA ATGCTGATTC TGGCGAAGTG 
CGTACTGTTG AAGGTGGCAC TGCAGTCAAA GTGGCTTCAA ACCGCTGGTT ACTTGCGCTT 
ACAGCAGAAG CAGCACAATC GTTATTGGAA GACAGCCAAG CAACACTGAC CACTCATGAA 
CTTTGGACCC GTTTCGATAT TGAAGCGGCA CTACCATACG TGGCAGCAGA CGCGCAAAAC 
GAGCACATTC CACAAGCGCT AAACGTACAA GCGCTCGGCG GCATCAGCTT TACGAAAGGC 
TGTTACACAG GCCAAGAAAC CGTAGCACGC GCGAAATACC GCGGCACCAA CAAACGTGCA 
ATGTATATTG TTAAAGGTGC AACCGCTGAA GCCTTAGGTG AGGGTGCGAT CGAATTGGAA 
CGTAGTGTCG GTGAAAACTG GCGTTCAGTA GGCGCATTGC TCACACATTA CCAATTCAGC 
GACAACCAAG CGATGGGTCT CATTGTGTTA CCAAACAACC TAGACGATGA CACTCGTCTG 
CGCTTGGTTA CTCAGCCAGA GTGCGAATGG GAAATCGCAG CACTACCTTA CAGTCTTGAC 
GATGAGTAA
 
Protein sequence
MEWQTRFSPL NLSTQDALPE LSISLLDNLG MITMVGDDKK SYLHGQVTCD VVSLEKDQSM 
LGAHCDAKGK VWSVFRLFHH NDGYAMVQPK SAIEVELKEI KKYAVFSKVT IEESSDIVLG 
VAGENADAFI STLNADSGEV RTVEGGTAVK VASNRWLLAL TAEAAQSLLE DSQATLTTHE 
LWTRFDIEAA LPYVAADAQN EHIPQALNVQ ALGGISFTKG CYTGQETVAR AKYRGTNKRA 
MYIVKGATAE ALGEGAIELE RSVGENWRSV GALLTHYQFS DNQAMGLIVL PNNLDDDTRL 
RLVTQPECEW EIAALPYSLD DE