Gene VIBHAR_03536 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_03536 
Symbolrnc 
ID5556389 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand- 
Start bp3588412 
End bp3589089 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content48% 
IMG OID640909016 
Productribonuclease III 
Protein accessionYP_001446699 
Protein GI156975792 
COG category[K] Transcription 
COG ID[COG0571] dsRNA-specific ribonuclease 
TIGRFAM ID[TIGR02191] ribonuclease III, bacterial 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTCTC CAATTGATAA ACTAGAGAGA AAGCTCGGCT ACCAATTTAA GGATGCTGGG 
CTTATCAACT TGGCGCTGAC TCACCGCAGC GCCAACAGCA AGCATAATGA ACGTCTTGAG 
TTTCTGGGCG ATTCAATTTT AAGTTTTGTC ATCGCTGATG ATCTGTACCA TCGTTTCCCG 
AAAGTGAACG AAGGTGACAT GAGCCGTATG CGCGCTACTT TGGTACGTGG GCACACATTG 
GCGGAACTGG GTCGTGAATT CGATCTAGGA GATTATTTAA AATTAGGTCC AGGTGAATTG 
AAGAGTGGCG GATTCCGCCG AGACTCTATT CTAGCCGATG CGGTAGAAGC CATTATTGGT 
GCGATTTACC TTGATAGTGA TATTGAAGCC GTGCGCGGCA TTGTACTGAG CTGGTACAAC 
TCGCGTCTTG AGGCGATCAA GCCTGGCGTA TCACAAAAAG ATCCAAAAAC TCGCCTACAA 
GAGTTCCTGC AAGGCAGAAG AAAACCGCTG CCTGTCTACA CAGTGACTAA TATTAAAGGT 
GAAGCGCACA ACCAAGAGTT CACGGTTGAG TGTGACGTAG CAGGTGTGGA TAAGCCTGTA 
ATCGGTAAAG GCACCAGCCG CCGCAAGGCA GAACAAGCGG CTGCAGAAAC GGCACTTGAG 
CAATTAACGA ATGGCTGA
 
Protein sequence
MNSPIDKLER KLGYQFKDAG LINLALTHRS ANSKHNERLE FLGDSILSFV IADDLYHRFP 
KVNEGDMSRM RATLVRGHTL AELGREFDLG DYLKLGPGEL KSGGFRRDSI LADAVEAIIG 
AIYLDSDIEA VRGIVLSWYN SRLEAIKPGV SQKDPKTRLQ EFLQGRRKPL PVYTVTNIKG 
EAHNQEFTVE CDVAGVDKPV IGKGTSRRKA EQAAAETALE QLTNG