Gene VIBHAR_03534 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_03534 
Symbol 
ID5555441 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand- 
Start bp3586613 
End bp3587272 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content48% 
IMG OID640909014 
Productrecombinational DNA repair protein 
Protein accessionYP_001446697 
Protein GI156975790 
COG category[L] Replication, recombination and repair 
COG ID[COG1381] Recombinational DNA repair protein (RecF pathway) 
TIGRFAM ID[TIGR00613] DNA repair protein RecO 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGATCCTTG ATGTATTCAG CGAGGAGTAT GGTCGTATCA CGCTGATGGC GAAAGGCGCG 
CGCAGCAAAC GCTCTAATCT TAAAGGGGCA TTACAGCCCT TCACGCCACT ATTGCTGAAA 
TGGTCTGGCA AAGGTTCGAT GAAAACCTTA CGTCAGGCTG AGCCAATCAG TTTGGGTTTG 
CCGTTGTTCG GGATAAACCT TTACTCCGCA ATGTACGTAA ATGAATTAGT CGGGCGCGTC 
TTAATGGCGG AAGTGCCGAT GCCTGCGCTG TTTCATGATT ATCTGCATGC ACTAACGGAA 
TTGGCTCAGA GTGATAACCC TGAACCGGGC TTGCGTCGTT TTGAATTGGC CCTGTTGTCT 
TCAATGGGCT ATGGCGTCGA TTTCTTGCAT TGTGCCGGGA CGGGGGAGCC TGTCGATCCT 
GAGATGACTT ACCGTTATCG TGAGCAAAAG GGATTCATCG CTTCAGTAAG GCGCGACAAC 
CTGACATTTT TAGGTAATGA ATTGATTGCG ATTAGTGAAC GGCGATTCGT CACTAAAGAG 
CAATTAAAAG CGGCGAAACG CTTTACACGT ATGGCATTAA AGCCGTATCT TGGCGGCAAA 
CCTTTAAAAA GTCGCGAATT ATTCATTCAG ACATATCGAG CACGGAGTAA CGGAAAATGA
 
Protein sequence
MILDVFSEEY GRITLMAKGA RSKRSNLKGA LQPFTPLLLK WSGKGSMKTL RQAEPISLGL 
PLFGINLYSA MYVNELVGRV LMAEVPMPAL FHDYLHALTE LAQSDNPEPG LRRFELALLS 
SMGYGVDFLH CAGTGEPVDP EMTYRYREQK GFIASVRRDN LTFLGNELIA ISERRFVTKE 
QLKAAKRFTR MALKPYLGGK PLKSRELFIQ TYRARSNGK