| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_03523 |
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| Symbol | ispD |
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| ID | 5553275 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio harveyi ATCC BAA-1116 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009783 |
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| Strand | - |
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| Start bp | 3571734 |
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| End bp | 3572462 |
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| Gene Length | 729 bp |
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| Protein Length | 242 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640909003 |
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| Product | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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| Protein accession | YP_001446686 |
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| Protein GI | 156975779 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
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| TIGRFAM ID | [TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGGAAGA GCATTAATAT GTTGGATACT AACACTCCAA CCCATATTGC CATTGTGCCA
GCAGCTGGTG TTGGCAGCCG CATGAAGGCA GATCGCCCAA AACAATACCT GTTGATTGAC
GGCAAAGCGG TACTGGAACA TACCGTAGAG AAACTGCTTT CTCACCCAAA GATTTCTAAG
GTTGTCGTGG CTATTACCGA CGGCGACCCA TACTACCCTG AACTGTCCAT TGCTCAACAT
CCTGATGTGA TTCGTGTGGC TGGTGGCAAA GAGAGGGCAG ACTCTGTGTT ATCAGGGCTA
AACTATGTAA GTACACATCT GGAAAGCGAG TGGGTATTAG TCCACGACGC GGCAAGACCG
TGTGTATTAA CATCCGACAT TGACCGTTTG ATTGATGTTT GTTGCGCTCA TCCTACGGGT
GGCATTCTCG CTTCTCCAGT AAGAGACACG ATGAAGCGAG CAAACGTGGC ACAAGATATC
GATCATACGG TAGATAGAGA AGCATTGTGG CATGCATTAA CTCCACAAAT GTTTAAAACT
CAGCAGCTTA CTCAAGCACT GGCTGACGCA TTAGAACAAG GTGCAACCAT TACTGATGAA
GCCTCGGCTT TGGAATGGTT AGGCGAAAAG CCTGCACTTG TTCAAGGGAA TGCGAATAAT
ATAAAAATTA CTCAGCCAGA AGATCTTGCG TTAGCCGAGT TTTATCTCAG CCGTGAGCGC
GGCGAATAA
|
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| Protein sequence | MRKSINMLDT NTPTHIAIVP AAGVGSRMKA DRPKQYLLID GKAVLEHTVE KLLSHPKISK
VVVAITDGDP YYPELSIAQH PDVIRVAGGK ERADSVLSGL NYVSTHLESE WVLVHDAARP
CVLTSDIDRL IDVCCAHPTG GILASPVRDT MKRANVAQDI DHTVDREALW HALTPQMFKT
QQLTQALADA LEQGATITDE ASALEWLGEK PALVQGNANN IKITQPEDLA LAEFYLSRER
GE
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