Gene VIBHAR_03522 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_03522 
SymbolispF 
ID5554863 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand- 
Start bp3571243 
End bp3571719 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content48% 
IMG OID640909002 
Product2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 
Protein accessionYP_001446685 
Protein GI156975778 
COG category[I] Lipid transport and metabolism 
COG ID[COG0245] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 
TIGRFAM ID[TIGR00151] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTCGAA TTGGTCATGG TTTCGACGTA CATAAATTCG GTGGTGAAGG TCCGGTAATC 
ATTGGTGGCG TAGCGATCCC TTACGAACAA GGTTTAATTG CACACTCAGA TGGTGATGTA 
GCGCTGCATG CGTTAACGGA TGCCCTGCTT GGCGCGATTG CTGCGGGCGA CATTGGTCGT 
CACTTCCCTG ATACGGATGA CAAATGGAAA GGCGCAGATA GTCGTGAACT ACTGAAAGAT 
GTTTACCGTC GAGTCAAAGA GCAAGGCTAC CGTCTTGGTA ATGCCGATGT CACTATCATG 
GCACAAGCGC CGAAGATGGC ACCGCACATT GACGCAATGT GTGCTGCCAT TGCCGAAGAC 
CTCGAAACCG ACATTAGCAA CATTAACGTA AAAGCAACGA CGACAGAACG TCTTGGTTTT 
ACTGGACGCA AAGAAGGCAT TGCAACGGAA GCAGTTGTAC TTCTGTTTAA GCAATAA
 
Protein sequence
MIRIGHGFDV HKFGGEGPVI IGGVAIPYEQ GLIAHSDGDV ALHALTDALL GAIAAGDIGR 
HFPDTDDKWK GADSRELLKD VYRRVKEQGY RLGNADVTIM AQAPKMAPHI DAMCAAIAED 
LETDISNINV KATTTERLGF TGRKEGIATE AVVLLFKQ