Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_03496 |
Symbol | |
ID | 5554280 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009783 |
Strand | + |
Start bp | 3551841 |
End bp | 3552518 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640908976 |
Product | hypothetical protein |
Protein accession | YP_001446668 |
Protein GI | 156975761 |
COG category | [R] General function prediction only |
COG ID | [COG3271] Predicted double-glycine peptidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGTTT GGCAAAACTT ACCTTGGCTG TTGCTGGCTC TGTCAGCTTC AGCCAACTCA TTGGAGTTTC TCCCTCATCG GGGACATTTT TCTGTGCCTG TTAAAAGCTA CAAAGAAATC GTATTTGGTG ATGTATTTCG TCAACAGTAT GATTTCAGTT GCGGTTCAGC AGCACTGGCC TCTCTATTGA CCTATCACTA TCAAACCCCT TCTTCAGAAC AAGATATTTT TAAAAGCATG TACGACAAGG GAGATAAAAA GAAGATCAAA GAGAAAGGCT TTTCACTACT AGACATGAAA GTTTACCTCG ATTCCATTGG ACTTAACTCA GACGGCTTTC AAGTAGGATT AGAAAAGATT CGCGATGTAG GGGTCCCAGG GATCACACTC GTCAATTTTG ATGGTTACAT GCACTTCGTG GTGATCAGAG GAATGAACTC AGACTCCGTA ATCTTAGGCG ATCCATCTCG GGGCACCATG ATCATTAAAT ACGAAGAGTT CCAGAAATAC TATCAAGGGA TTGTGCTTCT AATCCGTAAC GAAGCTGAAG TTGGTCGATC TGGTTTTATT ACTGACGATA AGTTTGCTAT TTATCATTCC TCTCCCCTAG AAAGCGGTGT GCAAAGAGAT TCTCTCGGTG TGTTTAGCAT TACGCTCCCC ATCGCTGGAG AGAACTAG
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Protein sequence | MKVWQNLPWL LLALSASANS LEFLPHRGHF SVPVKSYKEI VFGDVFRQQY DFSCGSAALA SLLTYHYQTP SSEQDIFKSM YDKGDKKKIK EKGFSLLDMK VYLDSIGLNS DGFQVGLEKI RDVGVPGITL VNFDGYMHFV VIRGMNSDSV ILGDPSRGTM IIKYEEFQKY YQGIVLLIRN EAEVGRSGFI TDDKFAIYHS SPLESGVQRD SLGVFSITLP IAGEN
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