Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_03491 |
Symbol | |
ID | 5552849 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009783 |
Strand | - |
Start bp | 3546607 |
End bp | 3548388 |
Gene Length | 1782 bp |
Protein Length | 593 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640908971 |
Product | oxaloacetate decarboxylase |
Protein accession | YP_001446663 |
Protein GI | 156975756 |
COG category | [C] Energy production and conversion [I] Lipid transport and metabolism |
COG ID | [COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit [COG5016] Pyruvate/oxaloacetate carboxyltransferase |
TIGRFAM ID | [TIGR01108] oxaloacetate decarboxylase alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTAAAC CACTGGCTAT CACTGATGTG GTCCTTCGTG ACGCCCATCA ATCCCTGTTT GCTACGCGTA TGCGTATCGA AGATATGCTG CCTATCGCAG CTGAGTTAGA TAAGGTTGGT TACTGGTCTT TAGAGACCTG GGGTGGCGCA ACATTTGATG CGTGTATCCG TTTCTTGGGA GAAGACCCAT GGGAGCGCCT ACGCGAATTA AAAAAAGCGA TGCCAAACAC ACCAATGCAA ATGCTACTAC GTGGTCAAAA CCTTTTAGGA TACCGTCATT ATGCTGACGA CGTAGTAGAG AAGTTTGTTG AGCGTGCTCA TGCCAATGGT ATGGACGTGT TCCGCATCTT TGATGCAATG AATGACGTAC GTAACTTCCA AAAGGCGGTA AAAGCGGCAG TAGATGTCGG TGCTCACGCA CAAGGTACCT TGTCTTACAC CACCAGTCCG GTGCATAACA CGGATACTTG GGTTGATCTG GCTAAACACC TTGAAGATCT GGGTTGCCAC TCTCTGTGTA TTAAAGACAT GTCTGGCCTA CTTAAGCCGT ACGAAGCAGA AGAGCTGATC ACGCGCATCA AAGCATCTTG TGATGTGCCT CTTGCGCTTC ACTGCCATGC AACCACAGGG CTTTCTACGG CGACTGCAGT GAAAGCTGTA GAAGCGGGTA TCGATATTCT TGATACTGCG ATTTCGTCTA TGAGTTGTAC ATACGGCCAT ACGCCTACTG AGACAGTGGT TGCGATGCTG CAAGGCACAG AGCGTGATAC TAATCTGAAA CTCGACCAAA TCGAGCCTAT CGCGGCTTAC TTCCGTGAAG TACGTAAGAA ATACGCCAAG TGGGAAGGTC AGCTAAAAGG TGTGGATTCA CGCATTTTGA TCGCCCAAGT TCCGGGTGGC ATGTTGACCA ACATGGAAGG TCAGTTAAAA GAGCAAGGTG CTGCGGATCG TATTGATGAG GTATTGGAAG AGATCCCTCG TGTTCGTGAA GATCTTGGTT TTATCCCGCT GGTAACACCG ACGTCTCAGA TCGTTGGTAG TCAAGCGGTA ATCAACGTGC TGACAGGTGA GCGTTATAAG AGCATCACCA AAGAAACCGC TGGTGTTTTG AAGGGGGAAT ACGGTGCAGC GCCTGCTCCT GTTAATACAG CACTTCAAGC GAAAGTGTTG GATGGTAAAG AAGCTATTAC TTGTCGTCCT GCCGATTTAC TTGAAGCAGA AATGGAAAAC CTAACGGTTG ATTTAATGGA GAAAGCGCAA TCTGAAGGTA TTAAGCTCGC AAGTGAACGT GTTGATGATG TGCTTACTTA CGCACTGTTC CCTCAAGTAG GCCTGAAATT CCTGAAAAAT CGTGGTAATC CTGATGCCTT CGAACCAGCC CCAACGCTAG AAGCCGCGAA GCCTGCCGCA CAACCTGTAT CTGGTGGCGT TGAAACATAC AGCGTGCGTG TTGATGGCCA AGTGTATGCA GTGGAGGTAG GCCCTCAAGG TCAATTAACT TCTGTGACGC CAAATACAGC AACTGTACCT GCTCAACCTG CAGCGCCGAG CGCACCTGCA AATAGTGCCG CTGAAGCAGT GCCAGCCCCT CTTGCGGGCA ACATCTTTAA AGTGAATGTT CAACCGGGTG CTGAAGTTTT GGAAGGTGAC GTTCTCCTTA TCTTAGAAGC GATGAAGATG GAAACTGAAG TTCGTGCAGC ACGTGGTGGG GTAGTTCAAG AACTGAACGT GAAAGAAGGT GATGCCGTTA CGGTTGGTTC GCCACTGTTG AGTCTAGCAT AA
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Protein sequence | MSKPLAITDV VLRDAHQSLF ATRMRIEDML PIAAELDKVG YWSLETWGGA TFDACIRFLG EDPWERLREL KKAMPNTPMQ MLLRGQNLLG YRHYADDVVE KFVERAHANG MDVFRIFDAM NDVRNFQKAV KAAVDVGAHA QGTLSYTTSP VHNTDTWVDL AKHLEDLGCH SLCIKDMSGL LKPYEAEELI TRIKASCDVP LALHCHATTG LSTATAVKAV EAGIDILDTA ISSMSCTYGH TPTETVVAML QGTERDTNLK LDQIEPIAAY FREVRKKYAK WEGQLKGVDS RILIAQVPGG MLTNMEGQLK EQGAADRIDE VLEEIPRVRE DLGFIPLVTP TSQIVGSQAV INVLTGERYK SITKETAGVL KGEYGAAPAP VNTALQAKVL DGKEAITCRP ADLLEAEMEN LTVDLMEKAQ SEGIKLASER VDDVLTYALF PQVGLKFLKN RGNPDAFEPA PTLEAAKPAA QPVSGGVETY SVRVDGQVYA VEVGPQGQLT SVTPNTATVP AQPAAPSAPA NSAAEAVPAP LAGNIFKVNV QPGAEVLEGD VLLILEAMKM ETEVRAARGG VVQELNVKEG DAVTVGSPLL SLA
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