Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_03481 |
Symbol | |
ID | 5555988 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009783 |
Strand | - |
Start bp | 3534185 |
End bp | 3535567 |
Gene Length | 1383 bp |
Protein Length | 460 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640908961 |
Product | hypothetical protein |
Protein accession | YP_001446653 |
Protein GI | 156975746 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0541] Signal recognition particle GTPase |
TIGRFAM ID | [TIGR00959] signal recognition particle protein |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTGAGA ATTTAACGGA TCGATTATCC AAAACGCTGA AGAATATCAG TGGCAAAGGT CGTCTGACCG AAGACAACAT TAAAGAAACC CTACGTGAAG TACGCATGGC ACTATTGGAA GCGGACGTTG CGCTTCCTGT TGTACGTGAA TTTGTAAACC GCGTTAAAGA AAAAGCGGTT GGCGTAGAAG TTTCTAAATC CCTAACGCCG GGCCAAGAAT TCATCAAGAT CGTTCAAGCT GAGCTTGAAG CGGTAATGGG TGAGTCTAAC GAAGCGCTTA ACCTAGCAGC ACAGCCGCCA GCAGTACTTT TGATGGCAGG TCTACAAGGT GCGGGTAAAA CCACATCGGT AGGTAAGCTA TCTAAGCTTC TGAAAGAGCG CGATAAGAAG AAAGTCTTGG TTGTGTCTGC CGACGTTTAC CGTCCTGCGG CGATCAAACA GCTAGAAACC CTAGCATCAG ACATCGGTGT CGACTTCTTC CCATCTTCAC CAGATCAAAA GCCACTTGAT ATTGCTAACG CAGCAATTGA CCACGCGAAG AAGAAATTCT ACGACGTATT GATTGTCGAT ACCGCGGGTC GTTTGGCTAT CGATGAAGAA ATGATGGGTG AGATTAAAGA TCTTCACTCA GCGATTAACC CGGTTGAGAC GCTGTTCGTT GTTGATGCAA TGACAGGTCA AGATGCGGCG AACACAGCAA AAGCATTCGG TGATGCGCTA CCGCTAACTG GCGTGATTCT GACTAAAGTA GATGGTGACG CACGTGGTGG TGCGGCGCTA TCGGTTCGTC ATATCACGGG TAAGCCAATC AAATTCCTAG GTGTGGGTGA AAAGACCGAC GCACTAGAAC CGTTCCACCC TGATCGTGTT GCATCGCGTA TTCTAGGTAT GGGTGACGTA CTGTCACTGA TTGAAGACCT ACAACGCAAT GTTGACCAAG AAAAAGCAGA GAAACTAGCG AAGAAGTTCA AAGAGAAGAA AGGTTTTGAC CTTGAAGACT TCCGTGAACA GCTAGGTCAG ATGCAAAACA TGGGTGGCAT GATGGGCATG CTAGATAAGC TACCAGGTAT GTCTCAGCTA CCATCAGACG TAAAAGACAA AGTCGATGAC AAGATGTTCA AGCAAATGGA AGCGATCATC AGCTCAATGA CAATGAAAGA ACGTCAACGT CCTGAAATCA TCAAAGGTTC GCGTAAAAAG CGTATCGCTG CAGGTTCAGG TGTACAGGTT CAAGACGTTA ACCGTCTACT GAAGCAGTTC ACCCAAATGC AGAAGATGAT GAAGAAAATG CAGAAGGGCG GCATGAAAGG CATGATGCGT AACATGCAAG GCATGATGGG CGGTATGGGT GGCGGCGGTG GCTTCAACCC ATTTGGTCGT TAA
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Protein sequence | MFENLTDRLS KTLKNISGKG RLTEDNIKET LREVRMALLE ADVALPVVRE FVNRVKEKAV GVEVSKSLTP GQEFIKIVQA ELEAVMGESN EALNLAAQPP AVLLMAGLQG AGKTTSVGKL SKLLKERDKK KVLVVSADVY RPAAIKQLET LASDIGVDFF PSSPDQKPLD IANAAIDHAK KKFYDVLIVD TAGRLAIDEE MMGEIKDLHS AINPVETLFV VDAMTGQDAA NTAKAFGDAL PLTGVILTKV DGDARGGAAL SVRHITGKPI KFLGVGEKTD ALEPFHPDRV ASRILGMGDV LSLIEDLQRN VDQEKAEKLA KKFKEKKGFD LEDFREQLGQ MQNMGGMMGM LDKLPGMSQL PSDVKDKVDD KMFKQMEAII SSMTMKERQR PEIIKGSRKK RIAAGSGVQV QDVNRLLKQF TQMQKMMKKM QKGGMKGMMR NMQGMMGGMG GGGGFNPFGR
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