Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_03471 |
Symbol | |
ID | 5556436 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009783 |
Strand | + |
Start bp | 3525928 |
End bp | 3526797 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640908951 |
Product | Type II secretory pathway, prepilin signal peptidase PulO |
Protein accession | YP_001446643 |
Protein GI | 156975736 |
COG category | [N] Cell motility [O] Posttranslational modification, protein turnover, chaperones [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1989] Type II secretory pathway, prepilin signal peptidase PulO and related peptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAGTAT TCCAGTACTA CCCATGGCTA TTCGTTGTGT TTGCCACAAT TTTCGGTTTG ATTGTGGGTA GTTTCCTCAA CGTGGTTATT TACCGTTTAC CCAAGATCAT GGAACTAGAA TGGCGACGTG AGTGCGCTGA ATCCTTCCCT GAATATAAGA TTGAACCACC CAAAGAGACG CTGACGTTAA GTGTACCTCG CTCGTCTTGT CAGCAATGCG GAACACCCAT TCGCATCCGA GACAACATTC CGGTAATTAG CTGGCTATTG CTGAAAGGCA AGTGCCACAA CTGCCAAGCG CCCATCAGTG CTCGCTACCC TCTTATTGAA CTGCTTACTG CGTTTTGTTC GGGTTTTATC GCTTTTCATT TCGGTTTTAG CTACTTCACT GTAGCGCTGG TTTTCTTTAC CTTTGTATTG ATTGCTGCCA CGTTTATCGA CCTCGATACC ATGTTGTTGC CAGACCAACT GACTCTACCA TTGATGTGGG CAGGTATCGC ACTTGCTCTT GCTGGTATCA GTCCTGTCAG CCTACAAGAT TCTATCATTG GTGCAATGGC GGGCTATCTG TGTCTTTGGA GTGTTTACTG GCTGTTTAAA CTCCTAACAG GCAAAGAAGG CATGGGCTAT GGTGACTTTA AACTCCTTGC GGCATTGGGC GCTTGGTTGG GTTGGCAATC TCTACCGATG ATCATTTTGC TCTCTTCGGT GGTCGGCGTC ATCTTTGGTC TTATCCAACT GCGCTTGCAA AAACAAGGTA TCGAGAAAGC CTTTCCTTTC GGCCCTTACC TTGCGATTGC TGGCTGGGTG AGCCTAATTT GGGGCCATCA AATCCTCAAC TGGTACTTTA CGTCGATTCT AGGAGTGTAA
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Protein sequence | MEVFQYYPWL FVVFATIFGL IVGSFLNVVI YRLPKIMELE WRRECAESFP EYKIEPPKET LTLSVPRSSC QQCGTPIRIR DNIPVISWLL LKGKCHNCQA PISARYPLIE LLTAFCSGFI AFHFGFSYFT VALVFFTFVL IAATFIDLDT MLLPDQLTLP LMWAGIALAL AGISPVSLQD SIIGAMAGYL CLWSVYWLFK LLTGKEGMGY GDFKLLAALG AWLGWQSLPM IILLSSVVGV IFGLIQLRLQ KQGIEKAFPF GPYLAIAGWV SLIWGHQILN WYFTSILGV
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