Gene VIBHAR_03468 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_03468 
Symbol 
ID5554273 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp3522480 
End bp3522905 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content42% 
IMG OID640908948 
ProductTfp pilus assembly protein major pilin PilA 
Protein accessionYP_001446640 
Protein GI156975733 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4969] Tfp pilus assembly protein, major pilin PilA 
TIGRFAM ID[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACGA ATAAACAGAA GAAGCAGCAA GGTTTTACGC TGATTGAATT GATGATTGTG 
GTGGCGATTA TTGGTGTCTT GTCTGCAGTA GCTATCCCTG CTTACAAAAA CTATGTAAAA
AAATCTGAAG CTGCTGCAGG AATGGGGACA GTACGTGCTC TTTTAACTAA TATCGATATG
TACATTCAGG AAAATGGAGC ATTTCCCGCG ACTAATAACC TTGCAGATCT TGGAGCCTCT
GCTGGTATGA ATACTCTTGG CACAATCGCA TTAACCCAAG ATGGAAGCGT CTCAGAGGCA
GGAAGCGTTG CATTTAACTT TGGTACCAAC GCAACACTCA ACAGTACAAA CATCACATAT
ACTCGAAGTG CCTCAGGCTG GTCTTGTAAT AACACTACAG GACAAACCAT TAAAAGCTGT
AACTAA
 
Protein sequence
MKTNKQKKQQ GFTLIELMIV VAIIGVLSAV AIPAYKNYVK KSEAAAGMGT VRALLTNIDM 
YIQENGAFPA TNNLADLGAS AGMNTLGTIA LTQDGSVSEA GSVAFNFGTN ATLNSTNITY
TRSASGWSCN NTTGQTIKSC N