Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_03468 |
Symbol | |
ID | 5554273 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009783 |
Strand | + |
Start bp | 3522480 |
End bp | 3522905 |
Gene Length | 426 bp |
Protein Length | 141 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640908948 |
Product | Tfp pilus assembly protein major pilin PilA |
Protein accession | YP_001446640 |
Protein GI | 156975733 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4969] Tfp pilus assembly protein, major pilin PilA |
TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAACGA ATAAACAGAA GAAGCAGCAA GGTTTTACGC TGATTGAATT GATGATTGTG GTGGCGATTA TTGGTGTCTT GTCTGCAGTA GCTATCCCTG CTTACAAAAA CTATGTAAAA AAATCTGAAG CTGCTGCAGG AATGGGGACA GTACGTGCTC TTTTAACTAA TATCGATATG TACATTCAGG AAAATGGAGC ATTTCCCGCG ACTAATAACC TTGCAGATCT TGGAGCCTCT GCTGGTATGA ATACTCTTGG CACAATCGCA TTAACCCAAG ATGGAAGCGT CTCAGAGGCA GGAAGCGTTG CATTTAACTT TGGTACCAAC GCAACACTCA ACAGTACAAA CATCACATAT ACTCGAAGTG CCTCAGGCTG GTCTTGTAAT AACACTACAG GACAAACCAT TAAAAGCTGT AACTAA
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Protein sequence | MKTNKQKKQQ GFTLIELMIV VAIIGVLSAV AIPAYKNYVK KSEAAAGMGT VRALLTNIDM YIQENGAFPA TNNLADLGAS AGMNTLGTIA LTQDGSVSEA GSVAFNFGTN ATLNSTNITY TRSASGWSCN NTTGQTIKSC N
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