Gene VIBHAR_03455 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_03455 
Symbol 
ID5554181 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand- 
Start bp3507450 
End bp3508424 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content44% 
IMG OID640908935 
ProductABC transporter, ATP-binding protein 
Protein accessionYP_001446627 
Protein GI156975720 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCCCCA ACGGTATTGG CATTCACGAT TCATCAACAG ATGGCAATGA TTACGCAATG 
TACGCATTAG AAATAGAACA GCTTCGCAAG ACTTATGCGG GCGGATTTGA AGCGTTGAAG 
GGCATCAGCC TAACAGTAGA AAAAGGCGAC TTCTACGCAC TTCTTGGGCC AAATGGTGCG 
GGTAAATCCA CCACAATTGG CATTATCTCT TCTTTAGTCA ACAAAACTTC GGGTACGACG 
AAGGTTTTTG GCTACGACAT CGATACGCAT CTTGAATTAG CGAAGCAGAA CTTAGGCTTG 
GTGCCACAAG AATTCAATTT CAACCAATTT GAAACGGTCG AGCAAATTGT AATGCAGCAA 
GCGGGCTACT ATGGCGTATC CAAAGAGCTT GCTAAAGTTC GCGCGGAAAA ATACCTAACT 
AAGCTCGATT TGTGGGAAAA ACGTAAAGAA CGCGCGCGTA ATTTGTCCGG TGGTATGAAG 
CGCCGTTTGA TGATTGCCCG TGCTTTGATG CATGAACCTC AGTTGCTGAT CCTTGATGAA 
CCAACTGCGG GTGTTGATAT CGAATTGCGC CGCTCTATGT GGGATTTCTT AAAAGAGATT 
AACCAAGAGC AGGGCATTAC TATCATCCTA ACAACCCACT ACCTTGAAGA GGCAGAAATG 
CTGTGTCGTA ACATCGGTAT CATCAATAAA GGTGAGCTGA TCGAGAATAC GACCATGAAA 
GCACTGCTTG GTAAACTGCG TGTTGAAACC TTCATTCTTG ATGTTGAGTT TGATGGTGAG 
ATGCCAGAGC TTGCGGGTGT GAATAGCCAA ACGATGATCA ATGGTTCATT AGAGATTGAA 
TTGGACAAGA GCCAAGGTCT GAACTCAGTA TTTAGTCAAC TTTCAGAGAG AGGGGTGAAA 
GTACTCTCTA TGCGTAATAA AGCAAACCGT TTGGAAGAGC TGTTTGTCAG CATCGTACGT 
GGAGGTAACC AATAA
 
Protein sequence
MIPNGIGIHD SSTDGNDYAM YALEIEQLRK TYAGGFEALK GISLTVEKGD FYALLGPNGA 
GKSTTIGIIS SLVNKTSGTT KVFGYDIDTH LELAKQNLGL VPQEFNFNQF ETVEQIVMQQ 
AGYYGVSKEL AKVRAEKYLT KLDLWEKRKE RARNLSGGMK RRLMIARALM HEPQLLILDE 
PTAGVDIELR RSMWDFLKEI NQEQGITIIL TTHYLEEAEM LCRNIGIINK GELIENTTMK 
ALLGKLRVET FILDVEFDGE MPELAGVNSQ TMINGSLEIE LDKSQGLNSV FSQLSERGVK 
VLSMRNKANR LEELFVSIVR GGNQ