Gene VIBHAR_03452 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_03452 
Symbol 
ID5554277 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp3504268 
End bp3505209 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content46% 
IMG OID640908932 
Productlipid A biosynthesis lauroyl acyltransferase 
Protein accessionYP_001446624 
Protein GI156975717 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1560] Lauroyl/myristoyl acyltransferase 
TIGRFAM ID[TIGR02207] lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGAAG CCATGAATGT CGTCCCATCT CCTCCTTTCT CTTTAAAATT ACTACGTCCC 
AAATACTGGT CTGTGTGGTT CGCTTTTGGT TTATTAGCGT TGATCGTTAA TCTGCTCCCT
TATCCAGTGC TCCGTGCATT AGGTAGAGGT ATTGGTTCAC TTGCTATGTC GCTGATGAAG
CGCCGCAGAA ACATCGCAAA ACGAAACCTT AAACTCTGTT TTCCTGAATA CAGCGATGCC
AAATGTGATG AGCTGGTAAA GGCAAATTTT AAATACACTG GCATGGCGTT GATAGAAACC
GGAATGGCGT GGTTTTGGCC TGATTGGCGT GTGCAGCGTC TAACTCAAGT TGTGGGTAAA
GAGCGCCTGC TTGAGCAAGA AAAGAATAGG CGAGGTGTGT TGGTGGTATG TAGCCATCAC
CTTAACTTGG AAATGACGGC GAGAATCTTT AGCCAGTTTG CGAAAGGCTA TGGCGTGTAT
CGTCCGAACT CAAATCCCGC TTATGAATTT ATTCAACATC GAGGCCGTAC GCGTTGTGGG
CATCAAATGA TAGATCGCAA AGACGTAAAG TCGATGCTCA AAGTCCTAAA GAATGGCCAG
CGATTATGGT ATTTGCCGGA TCACGATTAT GGTGCGGATA GCTCGGTATT TGCGCCTTTC
TTCGCCGTCA ATCAGGCCGC AAGTACGGCG GGGTCGAGTG TATTGGTTGA TGCAACCAAG
TGTGCGGTGA TGTCTGGTGT AACAGTAGTA AGCGACAATC AATACACCTT ATATGTTGGT
GGTGACTTGA GTGAACAATT TGAACGACGT AACCCGGTTA AAGCTGCGAG CATTTTAAAC
CAAGAGATTG AAAATATGAT CCGAAGAGAT ATTCCAGCAT GGATGTGGTT GCATAAGCGA
TTCAAGACAC GTCCTGAAGG GCTTCAATGC GTTTATTCGT AA
 
Protein sequence
MSEAMNVVPS PPFSLKLLRP KYWSVWFAFG LLALIVNLLP YPVLRALGRG IGSLAMSLMK 
RRRNIAKRNL KLCFPEYSDA KCDELVKANF KYTGMALIET GMAWFWPDWR VQRLTQVVGK
ERLLEQEKNR RGVLVVCSHH LNLEMTARIF SQFAKGYGVY RPNSNPAYEF IQHRGRTRCG
HQMIDRKDVK SMLKVLKNGQ RLWYLPDHDY GADSSVFAPF FAVNQAASTA GSSVLVDATK
CAVMSGVTVV SDNQYTLYVG GDLSEQFERR NPVKAASILN QEIENMIRRD IPAWMWLHKR
FKTRPEGLQC VYS