Gene VIBHAR_03450 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_03450 
SymbolpanB 
ID5553724 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp3502497 
End bp3503291 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content47% 
IMG OID640908930 
Product3-methyl-2-oxobutanoate hydroxymethyltransferase 
Protein accessionYP_001446622 
Protein GI156975715 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0413] Ketopantoate hydroxymethyltransferase 
TIGRFAM ID[TIGR00222] 3-methyl-2-oxobutanoate hydroxymethyltransferase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAA TGACCATTAA CGACCTGATT AAGTGGAAGC AAGAAGGTCG TAAATTTGCT 
ACTTCAACTG CATACGATGC AAGCTTTGCC CAACTTTTTG AAAGCCAAGA AATGCCAGTA
CTGCTGGTCG GCGACTCTCT AGGCATGGTT CTGCAAGGTA AAACAGATAC ATTGCCAGTA
ACCGTTGAAG ATATCGCTTA TCACACGCGC TCTGTACGCG CTGGTAGCCC AAACTGTCTA
TTGATGGCTG ATATGCCATT CATGAGCTAC GCAACGCCAG AACAAGCATG TGAGAACGCA
GCAACGCTAA TGCGTGCTGG TGCAAATATG GTAAAAATCG AAGGCGGCGA TTGGTTAGTT
GATACTGTTA AGATGCTAAC TGAACGCGCA GTTCCTGTTT GTGCTCACCT AGGCCTGACC
CCACAATCTG TAAACATCTT TGGTGGTTAC AAAGTACAAG GCCGCGATCA AGAAAAAGCC
GATCGCATGG TGAAAGACGC ATTGGCCCTG CAAGAAGCCG GCGCTCAAAT TGTTTTGTTA
GAATGTGTAC CTGCTGAATT GGCAGCTCGT ATTACTCAAG TTCTTGATGT GCCAGTGATC
GGCATCGGTG CTGGTAATGT GACCGACGGC CAGATTCTTG TTATGCATGA TATGTTTGGA
ATTTCGGCGA ACTACATGCC AAAATTCTCG AAAAACTTCC TTGCTGAAAC AGGCGATATG
CGCAAAGCCG TGGCTCAATA CATGGCTGAA GTTGAAAGCG GTGCATTCCC AGACGAAGCT
CATACCATTG CCTAG
 
Protein sequence
MKKMTINDLI KWKQEGRKFA TSTAYDASFA QLFESQEMPV LLVGDSLGMV LQGKTDTLPV 
TVEDIAYHTR SVRAGSPNCL LMADMPFMSY ATPEQACENA ATLMRAGANM VKIEGGDWLV
DTVKMLTERA VPVCAHLGLT PQSVNIFGGY KVQGRDQEKA DRMVKDALAL QEAGAQIVLL
ECVPAELAAR ITQVLDVPVI GIGAGNVTDG QILVMHDMFG ISANYMPKFS KNFLAETGDM
RKAVAQYMAE VESGAFPDEA HTIA