Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_03450 |
Symbol | panB |
ID | 5553724 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009783 |
Strand | + |
Start bp | 3502497 |
End bp | 3503291 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640908930 |
Product | 3-methyl-2-oxobutanoate hydroxymethyltransferase |
Protein accession | YP_001446622 |
Protein GI | 156975715 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0413] Ketopantoate hydroxymethyltransferase |
TIGRFAM ID | [TIGR00222] 3-methyl-2-oxobutanoate hydroxymethyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAA TGACCATTAA CGACCTGATT AAGTGGAAGC AAGAAGGTCG TAAATTTGCT ACTTCAACTG CATACGATGC AAGCTTTGCC CAACTTTTTG AAAGCCAAGA AATGCCAGTA CTGCTGGTCG GCGACTCTCT AGGCATGGTT CTGCAAGGTA AAACAGATAC ATTGCCAGTA ACCGTTGAAG ATATCGCTTA TCACACGCGC TCTGTACGCG CTGGTAGCCC AAACTGTCTA TTGATGGCTG ATATGCCATT CATGAGCTAC GCAACGCCAG AACAAGCATG TGAGAACGCA GCAACGCTAA TGCGTGCTGG TGCAAATATG GTAAAAATCG AAGGCGGCGA TTGGTTAGTT GATACTGTTA AGATGCTAAC TGAACGCGCA GTTCCTGTTT GTGCTCACCT AGGCCTGACC CCACAATCTG TAAACATCTT TGGTGGTTAC AAAGTACAAG GCCGCGATCA AGAAAAAGCC GATCGCATGG TGAAAGACGC ATTGGCCCTG CAAGAAGCCG GCGCTCAAAT TGTTTTGTTA GAATGTGTAC CTGCTGAATT GGCAGCTCGT ATTACTCAAG TTCTTGATGT GCCAGTGATC GGCATCGGTG CTGGTAATGT GACCGACGGC CAGATTCTTG TTATGCATGA TATGTTTGGA ATTTCGGCGA ACTACATGCC AAAATTCTCG AAAAACTTCC TTGCTGAAAC AGGCGATATG CGCAAAGCCG TGGCTCAATA CATGGCTGAA GTTGAAAGCG GTGCATTCCC AGACGAAGCT CATACCATTG CCTAG
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Protein sequence | MKKMTINDLI KWKQEGRKFA TSTAYDASFA QLFESQEMPV LLVGDSLGMV LQGKTDTLPV TVEDIAYHTR SVRAGSPNCL LMADMPFMSY ATPEQACENA ATLMRAGANM VKIEGGDWLV DTVKMLTERA VPVCAHLGLT PQSVNIFGGY KVQGRDQEKA DRMVKDALAL QEAGAQIVLL ECVPAELAAR ITQVLDVPVI GIGAGNVTDG QILVMHDMFG ISANYMPKFS KNFLAETGDM RKAVAQYMAE VESGAFPDEA HTIA
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