Gene VIBHAR_03433 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_03433 
Symbol 
ID5556375 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand- 
Start bp3480280 
End bp3481311 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content46% 
IMG OID640908913 
Producthypothetical protein 
Protein accessionYP_001446605 
Protein GI156975698 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCTGCG CACTATCGAT TAAAAACCTA ACTTGTCAGT ATGACGATCA GACTGTTCTG 
GAGTCTCTTT CTTTAGAAGT GGAACAAGGA CAGATTGTCT GTTTGCTCGG CGCGAGTGGT 
TGCGGTAAGA CAACGCTTTT GAAAGCCATT GCAGGCCTGC TTCCTCTGAG TTCAGGTCAA 
ATGAGTTTGA ACTGCCTGAC TATTGATGAC GGCGAAAACT GGTTGCCACC AGAGCAGCGT 
AATATTGGTA TGATCTTCCA AGATTACGCT TTATTCCCGC ATCTGACAGT GGCTGAGAAC 
ATTGATTTTG GCTTGAAAAA TGAAACGACA CAGCAAAAGC TCCTCAAAGT AGAAGAAATG 
CTCGGCTTGG TTCACCTTAA AGGTTACGGT GATCGTTATC CTCACCAGCT TTCTGGTGGT 
CAGCAGCAGC GCGTGGCGAT TGCCCGTTCA CTGGCTTACA AACCGGATCT TCTGTTGTTG 
GATGAACCAT TTTCCAATAT CGACACTCAA GTTCGTCATG AACTGATCCG TGAAATTCGT 
AAAATCTTTA AAGAGCAAGG CGTTACCGCA ATTTTCGTTA CTCACAGTCG TGAAGAGGCG 
TTTGCGTTTG CTGATAAGAT GGCAGTAATG AACCATGGTG TAATCGAGCA ATACGGAACA 
GCCTCTGAGC TTTACTACCA ACCTTCAAGT AAGTTTGTCG CAGACTTCTT AGGTGGTGGT 
AGTTACCTTG CTGCGAAGCG CATTTCTGAC AGTGAATTTG AAACTCATCT CGGTGTGGTG 
GAAGCTAATG CTCAGCAAGA AATCCAAGTG GATGCTGAAT GTGCATTACT GTTACGTCCT 
CAACATGTTC AAATCGCGGC GGATGAAGAG AGTGCAGTAA AAGTACTTGA GCAGCACTTT 
ATGGGTGACC ACTGTCGCTA CGTGATTGAT GTCAATGGTG ACCGACTGTT AGCAACTTCA 
ACTCAAGCGT TGAATGTTGG TGATAGTGTG ACGGTAAAAG TAGAAACGCA AGGCGTGCTA 
GCTTTCGCCT AA
 
Protein sequence
MSCALSIKNL TCQYDDQTVL ESLSLEVEQG QIVCLLGASG CGKTTLLKAI AGLLPLSSGQ 
MSLNCLTIDD GENWLPPEQR NIGMIFQDYA LFPHLTVAEN IDFGLKNETT QQKLLKVEEM 
LGLVHLKGYG DRYPHQLSGG QQQRVAIARS LAYKPDLLLL DEPFSNIDTQ VRHELIREIR 
KIFKEQGVTA IFVTHSREEA FAFADKMAVM NHGVIEQYGT ASELYYQPSS KFVADFLGGG 
SYLAAKRISD SEFETHLGVV EANAQQEIQV DAECALLLRP QHVQIAADEE SAVKVLEQHF 
MGDHCRYVID VNGDRLLATS TQALNVGDSV TVKVETQGVL AFA