Gene VIBHAR_03423 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_03423 
Symbol 
ID5553507 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp3465624 
End bp3467306 
Gene Length1683 bp 
Protein Length560 aa 
Translation table11 
GC content46% 
IMG OID640908903 
Producthypothetical protein 
Protein accessionYP_001446595 
Protein GI156975688 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0747] ABC-type dipeptide transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTGCCA ATATTAAAAA AACAGCACTA GCAACAGCAA TTATTGCAAC GGCTACTACA 
GGTTTCGCAT CAGTAGCTAC AGCCGCTGAG CGCAGTGAAC TGACTATCCA CCCTAAAGAG
TTTACAACTT TTGTTCGTAA CTTTAACCCT TTCTTGGGTG CAACTAACCT ACACACAACT
ACTGACTTTA TCTACGAGCC GCTAGTTGTT TTCAACGAAA TGCACGGCAA CACGCCAGTA
TTCCGTCTAG CAGAAAACTT CCAAATGTCT GACGACCTAA TGAGCGTAAC TTTCGATATT
CGTAAAGGCG TGAAATGGTC TGACGGTCAA GCGTTTACCG CTGATGACGT TGTTTACTCT
TTCAACCTAG TAAAAGAGAA GCCAGAACTA GACCAATCTG GTATCAACTC TTGGGTTACT
GGCGTAGAGA AAGTTAACGA TTACAAAGTT AAGTTCCGTC TAAGCGAAGC AAACTCAAAC
GTTCCTTACG AAATTGCTAA AGTACCTGTC GTACCTAAGC ACGTATGGAG CAAAGTGAAA
GATCCTTCAA CGTTCACGAA CGAAAACCCA GTAGGTACTG GTCCATTTAC AGAGATCGAC
ACTTTCACTC CGCAACTATA CATCCAGTGT GAAAACCCGA ACTACTGGGA TGCAGCGAAC
CTAGACGTTG ACTGTCTGCG TGTTCCTCAA ATCGCGAACA ATGACCAGTT CCTAGGTAAG
ATTGTTAACG GCGAAATGGA CTGGACTTCT TCATTCGTTC CAGACATCGA CCGCACTTAC
GCAGCAGCGA GCCCTAAACA CCACTACTGG TACCCGCCAG CAGGTACTCA AGCGTTCGTA
GTAAACTTTA AGAACCCAGA TGCAGCGAAA AACGAAGCAC TAACTAACGT TGACTTCCGT
CGCGCATTCT CTATGGCTCT TGACCGTCAC ACTATCATTG ATATCGCATT CTACGGCGGC
GGTACAGTGA ACGACTTCGC ATCTGGTCTT GGCTACGCAT TCGAAGCTTG GTCTGACGAG
AAGACTCACG ACAAGTTCAA GGGTTACAAC TCTTACAACG CTGAAGGCGC TAAGAAGCTT
CTAGCGAAAG CTGGCTTTAA AGATGTAAAC AAAGACGGTT TCGTTGACAC GCCATCCGGT
AAGTCTTTCG AGCTACTAAT CCAATCTCCA AACGGTTGGA CTGACTTCAA CAACACTGTA
CAGCTTGCTG TTGAGCAACT TGCAGAAGTA GGCATCAAAG CACGTGCTCG TACACCAGAC
TTCTCTGTGT ACAACCAAGC AATGCTTGAA GGTACTTACG ACGTTGCGTA CACCAACTAC
TTCCACGGTG CAGACCCATA CACTTACTGG AACAGTGCTT ACAACTCAGC ACTACAATCT
GGTGACGGTA TGCCTCGCTT CGCGATGCAC TTCTACAAGA ACGACAAGCT AGATGGTCTT
CTAAACAGCT TCTACAAGAC AGCTGACAAG CAAGAGCAGC TAGAAATCGC TCACGGTATT
CAGCAAATCA TCGCTCAAGA CCAAGTGACT ATCCCTGTGA TGTCTGGTGC TTACATGTAC
CAATACAACA CAACTCGCTT CACTGGTTGG TGGAACGAAG AAAATCCTAA GGGCCGTCCA
AACATTTGGG CTGGTATCCC AGAGCGTCTA CTTCACGTAC TGGACCTAAA ACCAGTTAAA
TAA
 
Protein sequence
MLANIKKTAL ATAIIATATT GFASVATAAE RSELTIHPKE FTTFVRNFNP FLGATNLHTT 
TDFIYEPLVV FNEMHGNTPV FRLAENFQMS DDLMSVTFDI RKGVKWSDGQ AFTADDVVYS
FNLVKEKPEL DQSGINSWVT GVEKVNDYKV KFRLSEANSN VPYEIAKVPV VPKHVWSKVK
DPSTFTNENP VGTGPFTEID TFTPQLYIQC ENPNYWDAAN LDVDCLRVPQ IANNDQFLGK
IVNGEMDWTS SFVPDIDRTY AAASPKHHYW YPPAGTQAFV VNFKNPDAAK NEALTNVDFR
RAFSMALDRH TIIDIAFYGG GTVNDFASGL GYAFEAWSDE KTHDKFKGYN SYNAEGAKKL
LAKAGFKDVN KDGFVDTPSG KSFELLIQSP NGWTDFNNTV QLAVEQLAEV GIKARARTPD
FSVYNQAMLE GTYDVAYTNY FHGADPYTYW NSAYNSALQS GDGMPRFAMH FYKNDKLDGL
LNSFYKTADK QEQLEIAHGI QQIIAQDQVT IPVMSGAYMY QYNTTRFTGW WNEENPKGRP
NIWAGIPERL LHVLDLKPVK