Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_03423 |
Symbol | |
ID | 5553507 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009783 |
Strand | + |
Start bp | 3465624 |
End bp | 3467306 |
Gene Length | 1683 bp |
Protein Length | 560 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640908903 |
Product | hypothetical protein |
Protein accession | YP_001446595 |
Protein GI | 156975688 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTGCCA ATATTAAAAA AACAGCACTA GCAACAGCAA TTATTGCAAC GGCTACTACA GGTTTCGCAT CAGTAGCTAC AGCCGCTGAG CGCAGTGAAC TGACTATCCA CCCTAAAGAG TTTACAACTT TTGTTCGTAA CTTTAACCCT TTCTTGGGTG CAACTAACCT ACACACAACT ACTGACTTTA TCTACGAGCC GCTAGTTGTT TTCAACGAAA TGCACGGCAA CACGCCAGTA TTCCGTCTAG CAGAAAACTT CCAAATGTCT GACGACCTAA TGAGCGTAAC TTTCGATATT CGTAAAGGCG TGAAATGGTC TGACGGTCAA GCGTTTACCG CTGATGACGT TGTTTACTCT TTCAACCTAG TAAAAGAGAA GCCAGAACTA GACCAATCTG GTATCAACTC TTGGGTTACT GGCGTAGAGA AAGTTAACGA TTACAAAGTT AAGTTCCGTC TAAGCGAAGC AAACTCAAAC GTTCCTTACG AAATTGCTAA AGTACCTGTC GTACCTAAGC ACGTATGGAG CAAAGTGAAA GATCCTTCAA CGTTCACGAA CGAAAACCCA GTAGGTACTG GTCCATTTAC AGAGATCGAC ACTTTCACTC CGCAACTATA CATCCAGTGT GAAAACCCGA ACTACTGGGA TGCAGCGAAC CTAGACGTTG ACTGTCTGCG TGTTCCTCAA ATCGCGAACA ATGACCAGTT CCTAGGTAAG ATTGTTAACG GCGAAATGGA CTGGACTTCT TCATTCGTTC CAGACATCGA CCGCACTTAC GCAGCAGCGA GCCCTAAACA CCACTACTGG TACCCGCCAG CAGGTACTCA AGCGTTCGTA GTAAACTTTA AGAACCCAGA TGCAGCGAAA AACGAAGCAC TAACTAACGT TGACTTCCGT CGCGCATTCT CTATGGCTCT TGACCGTCAC ACTATCATTG ATATCGCATT CTACGGCGGC GGTACAGTGA ACGACTTCGC ATCTGGTCTT GGCTACGCAT TCGAAGCTTG GTCTGACGAG AAGACTCACG ACAAGTTCAA GGGTTACAAC TCTTACAACG CTGAAGGCGC TAAGAAGCTT CTAGCGAAAG CTGGCTTTAA AGATGTAAAC AAAGACGGTT TCGTTGACAC GCCATCCGGT AAGTCTTTCG AGCTACTAAT CCAATCTCCA AACGGTTGGA CTGACTTCAA CAACACTGTA CAGCTTGCTG TTGAGCAACT TGCAGAAGTA GGCATCAAAG CACGTGCTCG TACACCAGAC TTCTCTGTGT ACAACCAAGC AATGCTTGAA GGTACTTACG ACGTTGCGTA CACCAACTAC TTCCACGGTG CAGACCCATA CACTTACTGG AACAGTGCTT ACAACTCAGC ACTACAATCT GGTGACGGTA TGCCTCGCTT CGCGATGCAC TTCTACAAGA ACGACAAGCT AGATGGTCTT CTAAACAGCT TCTACAAGAC AGCTGACAAG CAAGAGCAGC TAGAAATCGC TCACGGTATT CAGCAAATCA TCGCTCAAGA CCAAGTGACT ATCCCTGTGA TGTCTGGTGC TTACATGTAC CAATACAACA CAACTCGCTT CACTGGTTGG TGGAACGAAG AAAATCCTAA GGGCCGTCCA AACATTTGGG CTGGTATCCC AGAGCGTCTA CTTCACGTAC TGGACCTAAA ACCAGTTAAA TAA
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Protein sequence | MLANIKKTAL ATAIIATATT GFASVATAAE RSELTIHPKE FTTFVRNFNP FLGATNLHTT TDFIYEPLVV FNEMHGNTPV FRLAENFQMS DDLMSVTFDI RKGVKWSDGQ AFTADDVVYS FNLVKEKPEL DQSGINSWVT GVEKVNDYKV KFRLSEANSN VPYEIAKVPV VPKHVWSKVK DPSTFTNENP VGTGPFTEID TFTPQLYIQC ENPNYWDAAN LDVDCLRVPQ IANNDQFLGK IVNGEMDWTS SFVPDIDRTY AAASPKHHYW YPPAGTQAFV VNFKNPDAAK NEALTNVDFR RAFSMALDRH TIIDIAFYGG GTVNDFASGL GYAFEAWSDE KTHDKFKGYN SYNAEGAKKL LAKAGFKDVN KDGFVDTPSG KSFELLIQSP NGWTDFNNTV QLAVEQLAEV GIKARARTPD FSVYNQAMLE GTYDVAYTNY FHGADPYTYW NSAYNSALQS GDGMPRFAMH FYKNDKLDGL LNSFYKTADK QEQLEIAHGI QQIIAQDQVT IPVMSGAYMY QYNTTRFTGW WNEENPKGRP NIWAGIPERL LHVLDLKPVK
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